Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007141.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 84.6 | 84.6 |
| CDY40201 | Canola | cytosol | 84.46 | 84.46 |
| CDY02907 | Canola | cytosol, peroxisome, plasma membrane | 75.0 | 83.62 |
| Bra003208.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 83.19 | 83.31 |
| CDX67624 | Canola | cytosol, peroxisome, plasma membrane | 83.19 | 83.31 |
| Bra014775.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 80.37 | 81.4 |
| CDX76121 | Canola | cytosol | 53.53 | 80.47 |
| AT3G55130.1 | Thale cress | mitochondrion, peroxisome, plasma membrane | 80.08 | 78.21 |
| CDX73404 | Canola | plasma membrane | 85.17 | 76.43 |
| AT3G55100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 66.38 | 71.0 |
| AT3G55090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 65.11 | 62.64 |
| AT2G39350.1 | Thale cress | cytosol | 64.12 | 61.35 |
| AT5G13580.1 | Thale cress | cytosol, peroxisome, plasma membrane | 62.99 | 61.35 |
| Os05t0120200-01 | Rice | plasma membrane | 57.49 | 58.23 |
| TraesCS5B01G087400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 55.93 | 58.15 |
| TraesCS5D01G093600.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 55.79 | 58.0 |
| TraesCS5A01G078500.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 55.65 | 57.86 |
| HORVU5Hr1G021120.1 | Barley | cytosol, peroxisome, plasma membrane | 55.23 | 57.42 |
| TraesCS1D01G052000.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.93 | 57.23 |
| Os05t0120000-00 | Rice | plasma membrane | 54.94 | 57.21 |
| TraesCS1B01G066000.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.07 | 57.2 |
| AT3G53510.1 | Thale cress | plasma membrane | 59.6 | 57.1 |
| TraesCS1A01G049600.2 | Wheat | cytosol, peroxisome, plasma membrane | 56.36 | 57.0 |
| HORVU3Hr1G007180.1 | Barley | cytosol, peroxisome, plasma membrane | 53.25 | 56.44 |
| AT2G37360.1 | Thale cress | cytosol, peroxisome, plasma membrane | 60.17 | 56.42 |
| EES18923 | Sorghum | cytosol, peroxisome, plasma membrane | 56.78 | 56.3 |
| GSMUA_Achr5P28450_001 | Banana | plasma membrane | 55.37 | 56.16 |
| TraesCS3B01G047600.1 | Wheat | cytosol, peroxisome, vacuole | 53.25 | 55.85 |
| GSMUA_Achr8P02140_001 | Banana | cytosol, peroxisome, plasma membrane | 55.51 | 55.67 |
| Zm00001d011006_P001 | Maize | cytosol, peroxisome, vacuole | 55.79 | 55.48 |
| TraesCS3A01G036400.1 | Wheat | cytosol, peroxisome, vacuole | 52.82 | 55.41 |
| EES17614 | Sorghum | cytosol, peroxisome, vacuole | 55.51 | 55.35 |
| Zm00001d035553_P001 | Maize | plasma membrane | 55.51 | 55.04 |
| Zm00001d012438_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 56.92 | 54.24 |
| Zm00001d028689_P001 | Maize | cytosol, peroxisome, plasma membrane | 60.31 | 54.05 |
| Os01t0836600-01 | Rice | plasma membrane | 56.78 | 53.67 |
| EES01718 | Sorghum | cytosol, peroxisome, plasma membrane, plastid | 56.36 | 53.56 |
| EER95064 | Sorghum | cytosol, peroxisome, plasma membrane | 60.03 | 53.39 |
| HORVU0Hr1G007130.1 | Barley | plasma membrane, plastid | 56.64 | 52.97 |
| HORVU3Hr1G087130.1 | Barley | plasma membrane, plastid | 56.64 | 52.97 |
| TraesCS3B01G387500.1 | Wheat | plastid | 56.5 | 52.84 |
| TraesCS3D01G348400.1 | Wheat | plasma membrane, plastid | 56.36 | 52.78 |
| TraesCS3A01G354500.1 | Wheat | plasma membrane, plastid | 56.36 | 52.78 |
| Zm00001d042953_P001 | Maize | plasma membrane | 56.64 | 52.69 |
| TraesCS4B01G200600.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.47 | 52.27 |
| TraesCS4A01G103400.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.76 | 52.26 |
| Os03t0281900-01 | Rice | cytosol, plasma membrane | 57.91 | 52.1 |
| HORVU1Hr1G009920.2 | Barley | plasma membrane, plastid | 55.79 | 50.06 |
| TraesCS4D01G201700.1 | Wheat | mitochondrion, plasma membrane, plastid | 58.47 | 49.23 |
| GSMUA_Achr6P33280_001 | Banana | cytosol, peroxisome, plasma membrane | 54.8 | 43.16 |
| HORVU5Hr1G021110.1 | Barley | cytosol | 24.58 | 40.56 |
| HORVU4Hr1G058160.2 | Barley | cytosol, peroxisome | 37.43 | 40.4 |
| HORVU4Hr1G058070.2 | Barley | cytosol | 44.21 | 38.4 |
| AT1G53270.1 | Thale cress | plasma membrane | 29.52 | 35.42 |
| AT4G25750.1 | Thale cress | plasma membrane | 28.11 | 34.49 |
| AT5G52860.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 28.39 | 34.13 |
| Os03t0282100-00 | Rice | cytosol, nucleus, plastid | 36.3 | 33.55 |
| AT2G13610.1 | Thale cress | cytosol, peroxisome, plasma membrane | 30.37 | 33.13 |
| AT5G19410.2 | Thale cress | plastid | 28.81 | 32.23 |
| GSMUA_Achr6P08820_001 | Banana | plasma membrane | 52.68 | 30.18 |
| AT4G27420.1 | Thale cress | cytosol, peroxisome, plasma membrane | 25.28 | 28.06 |
| AT1G71960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 25.99 | 27.79 |
| AT1G31770.1 | Thale cress | cytosol, nucleus, peroxisome | 25.28 | 27.62 |
| AT3G25620.2 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 25.99 | 27.38 |
| AT5G06530.1 | Thale cress | plasma membrane | 27.12 | 25.57 |
| AT3G13220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 23.16 | 23.94 |
| AT2G01320.3 | Thale cress | peroxisome, plastid, vacuole | 24.01 | 23.35 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:824677 | UniProt:A0A178VDI3 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AEE79341.1 | EMBL:AK228550 | ArrayExpress:AT3G55110 | EnsemblPlantsGene:AT3G55110 |
| RefSeq:AT3G55110 | TAIR:AT3G55110 | RefSeq:AT3G55110-TAIR-G | EnsemblPlants:AT3G55110.1 | TAIR:AT3G55110.1 | Unigene:At.35051 |
| ProteinID:CAB82706.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | RefSeq:NP_191071.1 | ProteinID:OAP02952.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00211 | PFscan:PS50893 |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF180 | UniProt:Q9M2V5 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| UniParc:UPI00000A627B | SEG:seg | : | : | : | : |
Description
ABCG18ABC transporter G family member 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V5]
Coordinates
chr3:-:20424550..20427384
Molecular Weight (calculated)
78704.6 Da
IEP (calculated)
8.573
GRAVY (calculated)
0.122
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRVSAEILD ISHTGGNESP TLGELLKDFN DSGRKKYPGE NAPTQHILDL APAAETRSVP FLLSFNNLSY NVVLRRRFDF SRRKTASVKT LLDDITGEAR
101: DGEILAVLGG SGAGKSTLID ALAGRVAEDS LKGTVTLNGE KVLQSRLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSLPKSKKME RVETLIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPILLFL DEPTSGLDST NAFMVVQVLK RIAQSGSVVI MSIHQPSARI IGLLDRLIIL SHGKSVFNGS
301: PVSLPSFFSS FGRPIPEKEN ITEFALDVIR ELEGSSEGTR DLVEFNEKWQ QNQTARATTQ SRVSLKEAIA ASVSRGKLVS GSSGANPISM ETVSSYANPP
401: LAETFILAKR YIKNWIRTPE LIGMRIGTVM VTGLLLATVY WRLDNTPRGA QERMGFFAFG MSTMFYCCAD NIPVFIQERY IFLRETTHNA YRTSSYVISH
501: ALVSLPQLLA LSIAFAATTF WTVGLSGGLE SFFYYCLIIY AAFWSGSSIV TFISGLIPNV MMSYMVTIAY LSYCLLLGGF YINRDRIPLY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV KGVQVFDGTL LAEVSHVMKV KLLDTLSGSL GTKITESTCL RTGPDLLMQQ GITQLSKWDC LWITLAWGLF FRILFYLSLL
701: FGSKNKRT
101: DGEILAVLGG SGAGKSTLID ALAGRVAEDS LKGTVTLNGE KVLQSRLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSLPKSKKME RVETLIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPILLFL DEPTSGLDST NAFMVVQVLK RIAQSGSVVI MSIHQPSARI IGLLDRLIIL SHGKSVFNGS
301: PVSLPSFFSS FGRPIPEKEN ITEFALDVIR ELEGSSEGTR DLVEFNEKWQ QNQTARATTQ SRVSLKEAIA ASVSRGKLVS GSSGANPISM ETVSSYANPP
401: LAETFILAKR YIKNWIRTPE LIGMRIGTVM VTGLLLATVY WRLDNTPRGA QERMGFFAFG MSTMFYCCAD NIPVFIQERY IFLRETTHNA YRTSSYVISH
501: ALVSLPQLLA LSIAFAATTF WTVGLSGGLE SFFYYCLIIY AAFWSGSSIV TFISGLIPNV MMSYMVTIAY LSYCLLLGGF YINRDRIPLY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV KGVQVFDGTL LAEVSHVMKV KLLDTLSGSL GTKITESTCL RTGPDLLMQQ GITQLSKWDC LWITLAWGLF FRILFYLSLL
701: FGSKNKRT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.