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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76121 Canola cytosol 29.37 47.77
CDY50899 Canola cytosol 19.19 44.14
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 36.55 39.0
PGSC0003DMT400029838 Potato extracellular 35.25 38.85
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 37.86 38.82
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 36.68 38.81
KRG92984 Soybean cytosol, peroxisome, plasma membrane 37.86 38.67
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 36.42 38.54
Solyc04g010210.1.1 Tomato extracellular 35.51 38.1
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 36.55 38.04
CDY02907 Canola cytosol, peroxisome, plasma membrane 31.46 37.95
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 35.9 37.88
Bra005051.1-P Field mustard plastid 30.29 37.78
CDX69629 Canola plastid 35.9 37.77
AT3G53510.1 Thale cress plasma membrane 36.42 37.75
CDX74853 Canola plastid 30.29 37.6
Solyc05g054890.2.1 Tomato cytosol 36.81 37.6
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 35.51 37.41
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 35.77 37.23
CDX93388 Canola plasma membrane 35.9 37.11
KRG95875 Soybean cytosol, peroxisome, plasma membrane 35.64 37.09
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 35.9 37.06
CDX67624 Canola cytosol, peroxisome, plasma membrane 34.2 37.06
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 34.2 37.06
Os01t0836600-01 Rice plasma membrane 36.16 36.98
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 36.42 36.95
KRH67592 Soybean plastid 35.38 36.92
CDY18451 Canola cytosol, peroxisome, plasma membrane 35.64 36.79
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 33.94 36.72
CDY40201 Canola cytosol 33.94 36.72
CDY65003 Canola cytosol, peroxisome, plasma membrane 34.2 36.69
CDY37656 Canola cytosol, peroxisome, plasma membrane 34.07 36.61
CDX76119 Canola cytosol, peroxisome, plasma membrane 31.85 36.58
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 34.07 36.5
AT2G39350.1 Thale cress cytosol 35.25 36.49
Os05t0120200-01 Rice plasma membrane 33.29 36.48
CDY09810 Canola plastid 35.77 36.44
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 31.46 36.4
Os05t0120000-00 Rice plasma membrane 32.25 36.32
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 33.55 36.3
Os03t0281900-01 Rice cytosol, plasma membrane 37.08 36.09
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 33.94 35.86
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 33.16 35.77
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 32.64 35.77
CDX73549 Canola cytosol, peroxisome, plasma membrane 35.12 35.58
Bra014774.1-P Field mustard plasma membrane 29.37 35.55
Solyc09g005970.1.1 Tomato plasma membrane 34.2 35.5
PGSC0003DMT400061466 Potato plasma membrane 34.2 35.36
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 34.2 35.22
CDX73404 Canola plasma membrane 33.94 32.95
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 35.51 28.75
Os07t0191600-04 Rice nucleus, peroxisome, plasma membrane 23.11 25.5
Os01t0615500-00 Rice plastid 19.97 24.96
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 21.28 24.85
Os09t0401100-01 Rice extracellular 25.98 22.77
Os05t0384600-01 Rice cytosol, endoplasmic reticulum, peroxisome, plastid 19.84 22.52
CDX76122 Canola plasma membrane 35.9 21.45
Bra014776.1-P Field mustard cytosol 35.9 21.42
CDY02906 Canola plasma membrane 35.77 21.32
Os01t0121700-01 Rice plasma membrane 18.28 20.96
Os06t0503100-01 Rice cytosol, peroxisome, plasma membrane 12.79 20.16
Os08t0167000-01 Rice cytosol, nucleus, plasma membrane 19.45 19.68
Os11t0177400-01 Rice plasma membrane 12.14 19.66
Os06t0607700-01 Rice plasma membrane 17.36 19.33
Os03t0157400-01 Rice cytosol, peroxisome, plasma membrane 18.28 18.16
Bra005049.1-P Field mustard plasma membrane 6.14 15.82
CDY44641 Canola plasma membrane 6.14 15.82
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A0P0VWU6InterPro:AAA+_ATPaseInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
ProteinID:BAS83581.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0016787GO:GO:0016887InterPro:IPR003439EnsemblPlantsGene:Os03g0282100EnsemblPlants:Os03t0282100-00InterPro:P-loop_NTPase
PFAM:PF00005ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382
SUPFAM:SSF52540UniParc:UPI000393B8C6SEG:seg:::
Description
ABC TRANSPORTER G FAMILY MEMBER 6Similar to ATPase, coupled to transmembrane movement of substances. (Os03t0282100-00)
Coordinates
chr3:+:9664896..9667255
Molecular Weight (calculated)
83326.8 Da
IEP (calculated)
11.277
GRAVY (calculated)
-0.497
Length
766 amino acids
Sequence
(BLAST)
001: MSSSFRSRRT LPIEEDGEDA PRADLLPGHQ RSDRRSASST NLDQHVVLGS HSPGHVVVDL RPTAANVDGG GKLELDPVGR MPVHFVLAFH DLTYNVGRPR
101: RMAFWRRSRH VETDATTARG GGARAREGAL LLDGVSGEAR EGEIMAVLGA SGAGKTTLID ALADRIQRDS LRGAVTLNGE PLGGRMLKVI SAYVMQDDLL
201: YPMLTVAETL MYSAEFRLPR SLSASKKATR VQELIDQLGL RAAANTIIGD EGRRGVSGGE RRRVSIGIDI IHDPIILFLD EPTSGLDSTS AFMVVKVLQG
301: IAKSGSVVIM SIHQPSYRII GLIDRLMFLS RGRTVYYGPP ASLPLFFSEF GHPIPDGQNP VEFALDHVRQ LEAIPEGTDE LVEFSKAWRE KALARGHQNE
401: HRPWQAGVGR HHEHRRQRHR GGGGVHGQSG DVREPVVGGG VGAGAAGVHQ HAAHAGAVPD PAGHGGGDGV HPCHRVLAAG QHTQGRERAV RLLRHRRVHH
501: VLHQRRRAPG VPRGALHLPP GDGAQRLQAV LLHGLQRHRR LPASGRALPR LHGHHLLRRR PRRRRRGFPL LRPHRARLLL GRERLRHVPL RRGPPRDHRV
601: HGGGGRAGLL PPPERILHHP RPHPELLDMA ALPVADQVPV RGGDAERVRG GGREVLHARG ADVRRDADGE AAGGDEGEGA GGDEQVHGVG TEQRLVHHDG
701: AGHTGEAGGD GARQVELPLG HRRVGFPLPR ALLPHACARE QEQEEVNARA AMCSSCDRLV VDRLRW
Best Arabidopsis Sequence Match ( AT3G53510.1 )
(BLAST)
001: MSGLFGILSP AKRVNGDGLP LFYNIHKSVE LQRCHRDTAR VSVTLAELLM SVEDEGDDQS RAMDIAVASN FWSSVPSSRV PSSSPFVLSF KDLTYSVKIK
101: KKFKPFPCCG NSPFDGNDME MNTKVLLNGI SGEAREGEMM AVLGASGSGK STLIDALANR ISKESLRGDI TLNGEVLESS LHKVISAYVM QDDLLFPMLT
201: VEETLMFSAE FRLPSSLSKK KKKARVQALI DQLGLRNAAK TVIGDEGHRG VSGGERRRVS IGTDIIHDPI ILFLDEPTSG LDSTSAYMVV KVLQRIAQSG
301: SIVIMSIHQP SYRILGLLDK LIFLSRGNTV YSGSPTHLPQ FFSEFGHPIP ENENKPEFAL DLIRELEDSP EGTKSLVEFH KQWRAKQTSS QSRRNTNVSL
401: KDAISASISR GKLVSGATNL RSSFQTFANP FWTEMLVIGK RSILNSRRQP ELFGIRLGAV LVTGMILATI FWKLDNSPRG IQERLGFFAF AMSTTFYTCA
501: EAIPVFLQER YIFMRETAYN AYRRSSYVLA HTIISIPALI ILSAAFAAST FSAVGLAGGS EGFLFFFFTI LTAFWAGSSF VTFLSGVVSH VMIGFTVVVA
601: ILAYFLLFSG FFISRDRIPL YWIWFHYLSL VKYPYEGVLQ NEFEDPTKCF VRGIQMFDNS PLGQVPTAVK ISLLKSMSGV LGINVTAETC VTTGIDILKQ
701: QGITEISKWN CLWITVAWGF FFRVLFYFTL LIGSKNKRR
Arabidopsis Description
ABCG20ABC transporter G family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFG8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.