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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 27800704
plastid: 27992503
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0120000-00 Rice plasma membrane 83.83 86.18
EES18923 Sorghum cytosol, peroxisome, plasma membrane 85.98 84.17
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 85.55 83.99
Zm00001d035553_P001 Maize plasma membrane 84.41 82.63
EES17614 Sorghum cytosol, peroxisome, vacuole 81.69 80.42
CDY44641 Canola plasma membrane 30.04 70.71
Bra005049.1-P Field mustard plasma membrane 30.04 70.71
Bra005051.1-P Field mustard plastid 58.23 66.29
CDX74853 Canola plastid 58.23 65.96
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 63.66 61.46
PGSC0003DMT400029838 Potato extracellular 60.94 61.3
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 63.38 61.19
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 61.95 60.31
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 62.66 60.25
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 62.37 60.06
CDX69629 Canola plastid 62.52 60.03
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 64.09 59.97
KRG92984 Soybean cytosol, peroxisome, plasma membrane 63.95 59.6
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 62.66 59.51
Solyc04g010210.1.1 Tomato extracellular 60.52 59.24
Solyc05g054890.2.1 Tomato cytosol 63.52 59.2
AT2G39350.1 Thale cress cytosol 62.66 59.19
Os01t0836600-01 Rice plasma membrane 63.38 59.15
KRH67592 Soybean plastid 62.09 59.13
KRG95875 Soybean cytosol, peroxisome, plasma membrane 61.95 58.83
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 62.52 58.74
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 61.52 58.42
CDY09810 Canola plastid 62.52 58.11
CDY02907 Canola cytosol, peroxisome, plasma membrane 52.5 57.8
AT3G53510.1 Thale cress plasma membrane 61.09 57.78
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 58.23 57.49
CDX93388 Canola plasma membrane 60.8 57.35
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 60.66 57.14
CDY18451 Canola cytosol, peroxisome, plasma membrane 60.52 57.01
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 53.79 56.8
Solyc09g005970.1.1 Tomato plasma membrane 59.94 56.78
PGSC0003DMT400061466 Potato plasma membrane 59.94 56.55
CDX76119 Canola cytosol, peroxisome, plasma membrane 53.79 56.37
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 60.66 56.16
Os03t0281900-01 Rice cytosol, plasma membrane 62.95 55.91
CDY40201 Canola cytosol 56.37 55.65
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 56.22 55.51
CDX67624 Canola cytosol, peroxisome, plasma membrane 56.08 55.45
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 56.08 55.45
CDX76121 Canola cytosol 37.34 55.41
CDX73549 Canola cytosol, peroxisome, plasma membrane 59.66 55.16
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 55.08 55.08
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 55.94 55.07
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 56.22 54.21
CDY65003 Canola cytosol, peroxisome, plasma membrane 54.22 53.08
CDY37656 Canola cytosol, peroxisome, plasma membrane 53.93 52.88
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 54.08 52.87
CDX73404 Canola plasma membrane 56.65 50.19
CDY50899 Canola cytosol 21.17 44.44
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 59.94 44.29
Bra014774.1-P Field mustard plasma membrane 39.06 43.13
Os07t0191600-04 Rice nucleus, peroxisome, plasma membrane 39.2 39.48
Os06t0503100-01 Rice cytosol, peroxisome, plasma membrane 23.61 33.95
CDX76122 Canola plasma membrane 62.23 33.93
Bra014776.1-P Field mustard cytosol 62.23 33.88
CDY02906 Canola plasma membrane 61.95 33.7
Os01t0615500-00 Rice plastid 29.33 33.44
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.48 33.29
Os09t0401100-01 Rice extracellular 40.63 32.49
Os05t0384600-01 Rice cytosol, endoplasmic reticulum, peroxisome, plastid 30.19 31.26
Os11t0177400-01 Rice plasma membrane 19.46 28.75
Os06t0607700-01 Rice plasma membrane 26.32 26.74
Os01t0121700-01 Rice plasma membrane 24.18 25.3
Os08t0167000-01 Rice cytosol, nucleus, plasma membrane 27.18 25.1
Os03t0157400-01 Rice cytosol, peroxisome, plasma membrane 27.18 24.64
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:4337645InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSUniProt:B9FGJ2ProteinID:BAS92011.1ProteinID:EEE62138.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439EnsemblPlantsGene:Os05g0120200EnsemblPlants:Os05t0120200-01
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF294SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0000E12311RefSeq:XP_015637491.1
SEG:seg:::::
Description
ABC TRANSPORTER G FAMILY MEMBER 11Similar to ATPase, coupled to transmembrane movement of substances. (Os05t0120200-01)
Coordinates
chr5:+:1050046..1052382
Molecular Weight (calculated)
75857.2 Da
IEP (calculated)
9.441
GRAVY (calculated)
0.257
Length
699 amino acids
Sequence
(BLAST)
001: MATSAHTVLD VDSGGGAATA AAGPPVPYLL SFTDLSYSVR KGGGGVLSCL PSSRRRRHSN RLASADAPAP PDAPTKALLD GISGEARDGE LFAVMGASGS
101: GKSTLVDALA GRIARESLRG AVELNGEPLH GRRLRAISAY VMQDDLLYPM LTVRETLLFA AEFRLPRALS PDKKRARVDA LIDQLGLARA ADTIIGDEAH
201: RGVSGGERRR VSIGTDIVHD PILLFLDEPT SGLDSASAFM VVQVLRRIAQ SGSVVIMTIH QPSARILNIL DRLLLLSRGR TVYAGTPVGL KPFFSEFGDP
301: IPDNENPAEF ALDTIRELEH QPDGAAPLAD FNVKWQSMHA ALPAADSKDS KRCTMPLELA ITESVSRGKL VAGSGSGTAS STSVPTFANP LSVEVWVLMK
401: RSFTNTGRMP ELFVMRLGTI MVTGFILATI FWRLDDTPKG VQERLGFFAM AMSTMFYVCA DALPVFVQER HIYLRETAHN AYRRLSYVFA NAVVAFPPLV
501: FLSLAFAVTT FFAVGLAGGG GSFLFFVLII LASFWAGSGF VTFLSAVVPH VMLGYTVVVA ILAYFLLFSG FFINRDRIPS YWIWFHYLSL VKYPYQAVLQ
601: NEFRDATRCF SRGVEMFDGT PIGAMSRAVK LKVLDAISKT LGTNMTANTC VTTGADVLAQ QAVTDIGKWK CLLVTVAWGF FFRALFYVVL LVGSKNKRR
Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.