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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:golgi
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02907 Canola cytosol, peroxisome, plasma membrane 95.33 70.71
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 97.66 65.81
CDY40201 Canola cytosol 84.71 56.36
CDX67624 Canola cytosol, peroxisome, plasma membrane 83.23 55.45
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 80.47 53.53
CDX76119 Canola cytosol, peroxisome, plasma membrane 73.89 52.17
CDX73404 Canola plasma membrane 85.77 51.2
CDY37656 Canola cytosol, peroxisome, plasma membrane 73.25 48.39
CDY65003 Canola cytosol, peroxisome, plasma membrane 73.04 48.18
CDY50899 Canola cytosol 31.63 44.74
CDX74853 Canola plastid 55.84 42.63
GSMUA_Achr5P28450_001 Banana plasma membrane 61.15 41.26
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 61.36 40.93
CDX69629 Canola plastid 62.63 40.52
CDY09810 Canola plastid 62.63 39.23
CDX93388 Canola plasma membrane 60.51 38.46
CDY18451 Canola cytosol, peroxisome, plasma membrane 60.3 38.27
Os05t0120000-00 Rice plasma membrane 54.78 37.94
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.56 37.74
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.14 37.44
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.14 37.44
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 53.08 37.43
Os05t0120200-01 Rice plasma membrane 55.41 37.34
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 53.93 37.3
CDX73549 Canola cytosol, peroxisome, plasma membrane 59.66 37.17
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 54.56 37.14
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 54.56 37.03
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 58.39 37.01
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 54.99 37.0
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 61.78 36.84
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 57.96 36.64
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 52.23 36.44
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 52.23 36.44
EER95064 Sorghum cytosol, peroxisome, plasma membrane 61.57 36.43
EES17614 Sorghum cytosol, peroxisome, vacuole 54.56 36.2
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 58.17 36.2
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 58.17 36.2
EES18923 Sorghum cytosol, peroxisome, plasma membrane 54.78 36.13
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 57.96 36.11
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 57.96 36.11
TraesCS3B01G387500.1 Wheat plastid 57.96 36.06
Os01t0836600-01 Rice plasma membrane 57.32 36.05
Zm00001d042953_P001 Maize plasma membrane 58.17 36.01
HORVU5Hr1G021110.1 Barley cytosol 32.7 35.9
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 54.14 35.81
Zm00001d035553_P001 Maize plasma membrane 54.14 35.71
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 59.66 35.48
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 59.87 35.43
Os03t0281900-01 Rice cytosol, plasma membrane 57.75 34.56
HORVU4Hr1G058070.2 Barley cytosol 58.6 33.87
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 59.66 33.41
CDX96366 Canola cytosol 25.48 32.52
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 54.14 32.32
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 60.51 31.7
CDY36670 Canola cytosol 23.78 30.85
Os03t0282100-00 Rice cytosol, nucleus, plastid 47.77 29.37
CDY02516 Canola cytosol, peroxisome, plasma membrane 32.91 26.36
CDY59400 Canola cytosol, plasma membrane, plastid 32.7 26.19
CDX94418 Canola plastid 30.36 24.96
CDX89396 Canola plasma membrane 30.15 24.78
CDX93119 Canola cytosol, peroxisome, plasma membrane 31.63 24.63
CDX89610 Canola cytosol, peroxisome, plasma membrane 31.63 24.63
CDY27043 Canola plastid 30.79 24.62
CDX96159 Canola plastid 29.94 23.94
CDX92533 Canola plastid 31.63 23.69
CDX76122 Canola plasma membrane 63.91 23.48
CDY02906 Canola plasma membrane 63.69 23.35
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 31.85 22.87
CDX92829 Canola plasma membrane 31.21 22.83
CDX68292 Canola cytosol, peroxisome, plasma membrane 31.42 22.77
CDY29837 Canola plasma membrane 31.0 22.67
CDY13996 Canola plasma membrane 22.93 22.55
CDX72849 Canola cytosol, peroxisome, plasma membrane 32.27 22.29
CDY29304 Canola cytosol, peroxisome, plasma membrane 29.72 21.94
CDX89252 Canola cytosol, peroxisome, plasma membrane 29.51 21.79
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 31.42 21.64
CDY03668 Canola plasma membrane 31.42 21.57
CDY44641 Canola plasma membrane 13.59 21.55
CDX70095 Canola plastid 32.91 21.5
CDY04991 Canola plastid 32.48 21.31
GSMUA_Achr6P08820_001 Banana plasma membrane 55.41 21.12
CDY23205 Canola plastid 32.91 21.09
CDY47690 Canola cytosol, peroxisome, plastid 28.66 21.06
CDY50951 Canola cytosol, peroxisome, plastid 28.66 21.06
CDY49155 Canola cytosol, peroxisome, plasma membrane 28.87 20.96
CDX95330 Canola plastid 32.7 20.87
CDY46506 Canola cytosol, peroxisome, plasma membrane 29.51 20.81
CDY14079 Canola plasma membrane 33.12 20.74
CDY48079 Canola plastid 29.09 20.6
CDX98933 Canola plasma membrane 32.91 20.53
CDX99764 Canola cytosol, peroxisome, plasma membrane 29.72 20.44
CDY51602 Canola plastid 28.87 20.42
CDY12299 Canola cytosol, peroxisome, plasma membrane 28.66 18.96
CDY24203 Canola peroxisome 27.39 18.94
CDY43362 Canola cytosol, peroxisome, plasma membrane 27.39 18.94
CDY37372 Canola cytosol, peroxisome, plasma membrane 26.75 17.19
CDY40385 Canola cytosol, peroxisome, plasma membrane 26.75 17.1
CDY12359 Canola cytosol, nucleus, plasma membrane 10.83 16.94
CDX96365 Canola plasma membrane 9.55 11.66
CDY36671 Canola plasma membrane 7.64 10.4
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078CG24InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX76121ProteinID:CDX76121ProteinID:CDX76121.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00126403001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EEE7B4SEG:seg:::
Description
BnaA04g03850D
Coordinates
chrLK031806:+:1082082..1083602
Molecular Weight (calculated)
51881.7 Da
IEP (calculated)
7.657
GRAVY (calculated)
0.031
Length
471 amino acids
Sequence
(BLAST)
001: MPRVAAESQE ISFDGGCESP TLGELLKDLE YGHRKKESGE DASVHHVLDL ASPETRPVPF LLSFNNLCYD VKGKAASVKT LLNDVSGEVC DGDILAVLGA
101: SGAGKSTLID ALAGRVSSLR GTVTLNGEKL LKSQLLKVIS AYVMQDDLLF PMLTVKETLM FASEFRLPRS LSKSKKMARV EALINQLGLR NAADTIIGNE
201: GHRGVSGGER RRVSIGIDII HDPIVLFLDE PTSGLDSTNA FMVVQVLKRI ARSGSMVIMS IHQPSARIID LLDRLIILSR GKSVFSGSPT SLPQFLSDFG
301: HPVPGKENIT EFALDLVREL EGSTKGTEDV SRGKLVSGST SSNPISMETV SYANTPLVET YILSKRYIKN WSRTPELIIT RLATVLVTGL ILATIYWRLD
401: NTPRGAQERI AFFSFAMSTM FYTCADNLPV FIHERYIFLR ETTHNAYRTY SYVISHVLVS LWITPLSTNW F
Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)
001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR
Arabidopsis Description
ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.