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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89252 Canola cytosol, peroxisome, plasma membrane 98.59 98.59
CDX92829 Canola plasma membrane 91.38 90.53
CDY29837 Canola plasma membrane 90.91 90.06
AT4G27420.1 Thale cress cytosol, peroxisome, plasma membrane 82.76 82.76
VIT_19s0014g03280.t01 Wine grape cytosol, peroxisome, plasma membrane 64.58 66.13
PGSC0003DMT400039671 Potato plasma membrane 55.17 63.31
PGSC0003DMT400049667 Potato cytosol, peroxisome, plasma membrane 58.93 61.34
Solyc07g063400.2.1 Tomato cytosol, peroxisome, plasma membrane 57.68 60.03
Solyc12g013630.1.1 Tomato cytosol, peroxisome, plasma membrane 59.09 60.03
PGSC0003DMT400039676 Potato plasma membrane 57.52 58.35
Solyc12g013640.1.1 Tomato cytosol, peroxisome, plasma membrane 57.52 58.25
GSMUA_Achr1P08870_001 Banana cytosol, peroxisome, plasma membrane 54.23 56.26
GSMUA_Achr2P02720_001 Banana mitochondrion 51.1 54.79
CDY47690 Canola cytosol, peroxisome, plastid 53.76 53.51
CDY50951 Canola cytosol, peroxisome, plastid 53.45 53.2
CDY51602 Canola plastid 55.49 53.15
CDY48079 Canola plastid 54.86 52.63
CDY46506 Canola cytosol, peroxisome, plasma membrane 54.55 52.1
CDY49155 Canola cytosol, peroxisome, plasma membrane 52.98 52.08
CDX99764 Canola cytosol, peroxisome, plasma membrane 54.23 50.51
KRH20507 Soybean cytosol 49.22 49.92
CDY12359 Canola cytosol, nucleus, plasma membrane 22.73 48.17
CDY12299 Canola cytosol, peroxisome, plasma membrane 53.29 47.75
CDX68292 Canola cytosol, peroxisome, plasma membrane 47.49 46.62
CDY36670 Canola cytosol 26.49 46.56
CDX96366 Canola cytosol 26.65 46.07
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 48.43 45.18
CDY03668 Canola plasma membrane 48.28 44.9
CDX72849 Canola cytosol, peroxisome, plasma membrane 47.65 44.57
CDY36671 Canola plasma membrane 22.88 42.2
CDY23205 Canola plastid 47.34 41.09
CDX70095 Canola plastid 46.08 40.78
CDX96365 Canola plasma membrane 24.61 40.67
CDY04991 Canola plastid 45.61 40.53
CDX95330 Canola plastid 46.55 40.24
CDY14079 Canola plasma membrane 46.4 39.36
CDX98933 Canola plasma membrane 46.4 39.21
CDY43362 Canola cytosol, peroxisome, plasma membrane 39.97 37.44
CDY24203 Canola peroxisome 39.81 37.3
CDX76121 Canola cytosol 21.94 29.72
CDX93119 Canola cytosol, peroxisome, plasma membrane 26.8 28.26
CDX89610 Canola cytosol, peroxisome, plasma membrane 26.65 28.1
CDX94418 Canola plastid 24.92 27.75
CDY02516 Canola cytosol, peroxisome, plasma membrane 25.39 27.55
CDX89396 Canola plasma membrane 24.61 27.4
CDY59400 Canola cytosol, plasma membrane, plastid 25.24 27.38
CDX92533 Canola plastid 26.8 27.19
CDX96159 Canola plastid 24.45 26.49
CDY50899 Canola cytosol 13.79 26.43
CDY27043 Canola plastid 24.29 26.32
CDY13996 Canola plasma membrane 19.75 26.3
CDX74853 Canola plastid 24.61 25.45
CDX69629 Canola plastid 29.0 25.41
CDY02907 Canola cytosol, peroxisome, plasma membrane 25.24 25.35
CDX76119 Canola cytosol, peroxisome, plasma membrane 26.02 24.89
CDY09810 Canola plastid 29.0 24.6
CDX67624 Canola cytosol, peroxisome, plasma membrane 27.12 24.47
CDY40201 Canola cytosol 26.8 24.15
CDY65003 Canola cytosol, peroxisome, plasma membrane 26.65 23.81
CDY37656 Canola cytosol, peroxisome, plasma membrane 26.18 23.42
CDX73549 Canola cytosol, peroxisome, plasma membrane 27.12 22.88
CDX93388 Canola plasma membrane 26.33 22.67
CDY37372 Canola cytosol, peroxisome, plasma membrane 25.86 22.51
CDY40385 Canola cytosol, peroxisome, plasma membrane 25.86 22.39
CDY18451 Canola cytosol, peroxisome, plasma membrane 26.02 22.37
CDX73404 Canola plasma membrane 27.27 22.05
CDY44641 Canola plasma membrane 8.31 17.85
CDX76122 Canola plasma membrane 28.06 13.96
CDY02906 Canola plasma membrane 28.06 13.93
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078GVW6UniProt:A0A078GVW6InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY29304ProteinID:CDY29304ProteinID:CDY29304.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00042261001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF257
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EF37AFSEG:seg:
Description
BnaC01g19560DBnaC01g19560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVW6]
Coordinates
chrLK032234:-:349334..351920
Molecular Weight (calculated)
70978.6 Da
IEP (calculated)
8.801
GRAVY (calculated)
0.104
Length
638 amino acids
Sequence
(BLAST)
001: MDNQEVAMDV EAQIENNNDD RTLPFSIFKK ANLPITLKFE NIVYTVKVKE PKSWLSQTKV KTEEMTILKG INGIVKPGEI LAMLGPSGSG KTSLLTALGG
101: RVSEGKGKLT GNISYNNKPF SKGVKRATGF VTQDDALYPH LTVTETLVFT ALLRLPNSFK KQEKIKQAEA VVTELGLDRC KNTIIGEPFL RGVSGGERKR
201: VSIGQEILIN PSLLFLDEPT SGLDSTTAQR IVSILWELAR GGRTVVTTIH QPSSRLFYMF DKILLLSEGN PIYFGLGSNA MDYFGSVGYS PSVERINPSD
301: FLLDIANGVG SDELQRPEAL KEALVAVYKT TLLDNVINDL KGQYGHCTQS IESLGDSKHF GDWPTTWWQQ FCVLSERGLK HRRHDSFSGL KIGQVFVVSF
401: LCGLLWWKTD LSHLQDQIGL LFFVSSFWAF FPLFQQIFTF PEERRMLEKE RSSGMYRLSS YFMSRIVGDL PMELILPTIF LIITYWMAGL NPKPVNFLLT
501: LLVLLAHVLV SGGLGLALGA LVMDQKTATT LGSVIMLTFL LAGGYYVRHV PVFIAWIKYV SISYYTYKLL ILGQYTESEW YPCGEIGNSK CHVGDFEGIK
601: LIGFHSGLAS SFALAAMLVG YRVVAYIALM RIGKTKAG
Best Arabidopsis Sequence Match ( AT4G27420.1 )
(BLAST)
001: MDNQEVSMDV ETPIAKTNDD RSLPFSIFKK ANNPVTLKFE NLVYTVKLKD SQGCFGKNDK TEERTILKGL TGIVKPGEIL AMLGPSGSGK TSLLTALGGR
101: VGEGKGKLTG NISYNNKPLS KAVKRTTGFV TQDDALYPNL TVTETLVFTA LLRLPNSFKK QEKIKQAKAV MTELGLDRCK DTIIGGPFLR GVSGGERKRV
201: SIGQEILINP SLLFLDEPTS GLDSTTAQRI VSILWELARG GRTVVTTIHQ PSSRLFYMFD KLLLLSEGNP VYFGLGSNAM DYFASVGYSP LVERINPSDF
301: LLDIANGVGS DESQRPEAMK AALVAFYKTN LLDSVINEVK GQDDLCNKPR ESSRVATNTY GDWPTTWWQQ FCVLLKRGLK QRRHDSFSGM KVAQIFIVSF
401: LCGLLWWQTK ISRLQDQIGL LFFISSFWAF FPLFQQIFTF PQERAMLQKE RSSGMYRLSP YFLSRVVGDL PMELILPTCF LVITYWMAGL NHNLANFFVT
501: LLVLLVHVLV SGGLGLALGA LVMDQKSATT LGSVIMLTFL LAGGYYVQHV PVFISWIKYV SIGYYTYKLL ILGQYTANEL YPCGDNGKLR CHVGDFEGIK
601: HIGFNSGLVS ALALTAMLVV YRVIAYIALT RIGKTKSG
Arabidopsis Description
ABCG9ABCG9 [Source:UniProtKB/TrEMBL;Acc:A0A178V178]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.