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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23205 Canola plastid 94.31 94.69
CDY04991 Canola plastid 66.67 68.52
CDX70095 Canola plastid 66.94 68.52
KRH32924 Soybean cytosol, peroxisome, plasma membrane, plastid 68.16 68.16
KRH72054 Soybean cytosol, peroxisome, plasma membrane, plastid 68.56 68.1
KRG96304 Soybean cytosol, peroxisome, plasma membrane, plastid 67.48 67.66
KRH68048 Soybean plastid 67.62 67.43
CDY14079 Canola plasma membrane 68.02 66.76
CDX98933 Canola plasma membrane 68.16 66.62
Solyc01g006720.2.1 Tomato plastid 64.91 66.16
PGSC0003DMT400054994 Potato plastid 64.63 65.7
GSMUA_Achr8P04700_001 Banana cytosol, peroxisome, plasma membrane, plastid 63.28 62.77
EER92832 Sorghum plasma membrane 63.69 61.6
Zm00001d027723_P002 Maize cytosol, nucleus, plasma membrane 62.74 61.49
TraesCS4D01G271500.1 Wheat plastid 62.2 61.04
HORVU4Hr1G072620.1 Barley plastid 62.47 60.9
Os03t0157400-01 Rice cytosol, peroxisome, plasma membrane 63.41 60.7
TraesCS4B01G272400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 62.47 60.66
TraesCS4A01G032900.1 Wheat plastid 62.33 60.37
Bra033441.1-P Field mustard plastid 91.73 59.81
GSMUA_Achr6P23160_001 Banana plastid 58.67 58.91
GSMUA_Achr1P04620_001 Banana cytosol, peroxisome, plasma membrane, plastid 57.05 58.88
CDX89252 Canola cytosol, peroxisome, plasma membrane 40.24 46.55
CDY29304 Canola cytosol, peroxisome, plasma membrane 40.24 46.55
CDX92829 Canola plasma membrane 40.51 46.43
CDY29837 Canola plasma membrane 40.11 45.96
CDY47690 Canola cytosol, peroxisome, plastid 39.43 45.4
CDY50951 Canola cytosol, peroxisome, plastid 39.43 45.4
CDY49155 Canola cytosol, peroxisome, plasma membrane 39.7 45.15
CDY51602 Canola plastid 40.38 44.74
CDY48079 Canola plastid 39.97 44.36
CDY46506 Canola cytosol, peroxisome, plasma membrane 40.11 44.31
CDX99764 Canola cytosol, peroxisome, plasma membrane 39.84 42.92
CDY43362 Canola cytosol, peroxisome, plasma membrane 39.57 42.88
CDY24203 Canola peroxisome 39.43 42.73
CDX96366 Canola cytosol 21.14 42.28
CDX68292 Canola cytosol, peroxisome, plasma membrane 36.86 41.85
CDY36670 Canola cytosol 20.46 41.6
CDX72849 Canola cytosol, peroxisome, plasma membrane 37.94 41.06
CDY12299 Canola cytosol, peroxisome, plasma membrane 39.57 41.01
CDY12359 Canola cytosol, nucleus, plasma membrane 16.67 40.86
CDY03668 Canola plasma membrane 36.72 39.5
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 36.59 39.47
CDY36671 Canola plasma membrane 17.48 37.28
CDX96365 Canola plasma membrane 18.83 36.01
CDX76121 Canola cytosol 20.87 32.7
CDX89610 Canola cytosol, peroxisome, plasma membrane 24.39 29.75
CDX93119 Canola cytosol, peroxisome, plasma membrane 24.25 29.59
CDY02907 Canola cytosol, peroxisome, plasma membrane 25.34 29.45
CDY50899 Canola cytosol 13.28 29.43
CDY02516 Canola cytosol, peroxisome, plasma membrane 22.36 28.06
CDY59400 Canola cytosol, plasma membrane, plastid 22.36 28.06
CDX94418 Canola plastid 21.0 27.05
CDX89396 Canola plasma membrane 20.87 26.88
CDX92533 Canola plastid 22.9 26.87
CDX69629 Canola plastid 26.42 26.79
CDX74853 Canola plastid 22.22 26.58
CDX67624 Canola cytosol, peroxisome, plasma membrane 25.2 26.31
CDY13996 Canola plasma membrane 17.07 26.3
CDY40201 Canola cytosol 25.2 26.27
CDX76119 Canola cytosol, peroxisome, plasma membrane 23.58 26.09
CDY09810 Canola plastid 26.56 26.06
CDY37656 Canola cytosol, peroxisome, plasma membrane 25.07 25.95
CDY65003 Canola cytosol, peroxisome, plasma membrane 25.07 25.91
CDX93388 Canola plasma membrane 25.75 25.64
CDX96159 Canola plastid 20.46 25.64
CDY27043 Canola plastid 20.46 25.64
CDY18451 Canola cytosol, peroxisome, plasma membrane 25.61 25.47
CDX73549 Canola cytosol, peroxisome, plasma membrane 26.02 25.4
CDX73404 Canola plasma membrane 25.47 23.83
CDY37372 Canola cytosol, peroxisome, plasma membrane 22.36 22.51
CDY40385 Canola cytosol, peroxisome, plasma membrane 22.36 22.39
CDY44641 Canola plasma membrane 7.45 18.52
CDY02906 Canola plasma membrane 25.47 14.63
CDX76122 Canola plasma membrane 25.34 14.59
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078E0Z5InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX95330ProteinID:CDX95330ProteinID:CDX95330.1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00100999001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF286SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EEBF9ESEG:seg::
Description
BnaC04g28280D
Coordinates
chrLK031888:+:272938..276645
Molecular Weight (calculated)
82420.3 Da
IEP (calculated)
9.087
GRAVY (calculated)
-0.025
Length
738 amino acids
Sequence
(BLAST)
001: MEMGTSSSSG LVKAKSETLA EALKSSSLDF SNGGGSSHGR KQHVRASSSP SQSGSSNYRR NTHIRKAKTL DLGRLTGGEA LSRATSASLG LSFSFTGFAV
101: PHEEEIIPSE QSCSNEDNLE DIEAATSNVV KLQEEPTFPI YLKFIDITYK VTCKAMTSSS EKSILNGISG SAYPGEILAL MGPSGSGKTT LLNVLGGRIN
201: HQNMGGSVSY NDKPYSKHLK TRIGFVTQDD VLFPHLTVKE TLTYTALLRL PKTLTKQQKE QRAINIIQEL SLERCQDTMI GGSFVRGVSG GERKRVCIGN
301: EIMTNPSLLF LDEPTSSLDS TTALKIVQML QSIAKAGKTI VTTIHQPSSR LFHRFDKLVV LSRGSLLYFG KASEAMSYFS SIGCSPLLSM NPAEFLLDLA
401: NGNMNDISIP SALKEETKME KQRYKLYHIN CDVDAETQYL EEAYKTQIEV KEKKKLMEPV PLDEEVKLMI TCPKREWGLS WWDQYCILSL RGFKERKHDY
501: FSWLRVTQVL STAIILGLLW WQSDIQHPKG LQDQVGLLFF IAVFWGFFPV FTAIFTFPQE RAMLSKERES NMYRLSAYFV ARTTSDLPLD LILPVLFLVV
601: VYFMAGLRLR AESFFLSVLT VFLCIVAAQG LGLAIGASLM DLKKATTLAS VTVMTFMLAG GYFVKKVPMF IAWIRYMSFN YHTYKLLVKV QYEQIMQDVN
701: GEEIVNGLKE VSALVAMIIG YRLLAYLSLR RMKLHTLT
Best Arabidopsis Sequence Match ( AT3G13220.1 )
(BLAST)
001: MEIRRSTEEV EENHVMQITG SNGIVHNMEF MPQAYLRNQY SSEIDIDEEF VSTYPLEDAP LPIFLKFEDV EYKVRNSHAS SANLVKTMVS KVVTHTNPDP
101: DGYKHILKGI TGSTGPGEIL ALMGPSGSGK TTLLKIMGGR LTDNVKGKLT YNDIPYSPSV KRRIGFVTQD DVLLPQLTVE ETLAFAAFLR LPSSMSKEQK
201: YAKIEMIIKE LGLERCRRTR VGGGFVKGIS GGERKRASIA YEILVDPSLL LLDEPTSGLD STSATKLLHI LQGVAKAGRT VITTIHQPSS RMFHMFDKLL
301: LISEGHPAFY GKARESMEYF SSLRILPEIA MNPAEFLLDL ATGQVSDISL PDELLAAKTA QPDSEEVLLK YLKQRYKTDL EPKEKEENHR NRKAPEHLQI
401: AIQVKKDWTL SWWDQFLILS RRTFRERRRD YFDKLRLVQS LGVAVVLGLL WWKSKTDTEA HLRDQVGLMF YICIFWTSSS LFGAVYVFPF EKIYLVKERK
501: AEMYRLSVYY VCSTLCDMVA HVLYPTFFMI IVYFMAEFNR NIPCFLFTVL TILLIAITSQ GAGEFLGASV LSIKRAGMIA SLVLMLFLLT GGYYVQHIPK
601: FMQWLKYLSF MHYGFRLLLK VQYSADQLFE CGSKGGCRTL QSSSSFDTIN LNGGLQELWV LLAMAFGYRL CAYFCLRKKI SICHL
Arabidopsis Description
ABCG26ABC transporter G family member 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK50]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.