Factsheet for TraesCS4B01G272400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G271500.1	Wheat	plastid	98.55	99.6
TraesCS4A01G032900.1	Wheat	plastid	98.95	98.69
HORVU4Hr1G072620.1	Barley	plastid	98.03	98.41
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	88.16	86.9
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	84.47	85.26
EER92832	Sorghum	plasma membrane	85.53	85.19
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	73.29	74.87
VIT_08s0032g00790.t01	Wine grape	plastid	69.08	70.19
CDX70095	Canola	plastid	66.45	70.04
Solyc01g006720.2.1	Tomato	plastid	66.71	70.03
GSMUA_Achr6P23160_001	Banana	plastid	67.37	69.66
PGSC0003DMT400054994	Potato	plastid	66.45	69.56
CDY04991	Canola	plastid	65.66	69.5
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	67.37	69.38
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	67.76	69.31
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	65.13	69.23
AT5G06530.1	Thale cress	plasma membrane	67.63	68.44
KRH68048	Soybean	plastid	66.18	67.97
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	65.79	67.93
CDX98933	Canola	plasma membrane	67.37	67.81
CDY14079	Canola	plasma membrane	66.97	67.69
Bra009203.1-P	Field mustard	plasma membrane	67.24	67.68
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.18	66.89
CDY23205	Canola	plastid	60.66	62.72
CDX95330	Canola	plastid	60.66	62.47
TraesCS4B01G095200.1	Wheat	plastid	35.13	41.46
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	37.37	40.98
Bra033441.1-P	Field mustard	plastid	59.21	39.75
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	25.53	28.49
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	25.66	28.1
TraesCS3B01G017100.1	Wheat	extracellular, plasma membrane, vacuole	23.95	27.41
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	24.08	27.11
TraesCS3B01G251300.1	Wheat	plastid	21.05	26.45
TraesCS3B01G387500.1	Wheat	plastid	25.66	25.76
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	25.66	24.62
TraesCS3B01G285600.1	Wheat	cytosol, peroxisome, plasma membrane	23.03	24.51
TraesCS2B01G612200.1	Wheat	plasma membrane	21.71	24.44
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	20.92	24.35
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	20.53	23.57
TraesCS5B01G203200.1	Wheat	cytosol	24.87	21.7

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0009414
GO:GO:0009628	GO:GO:0010148	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF286	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G272400	EnsemblPlants:TraesCS4B01G272400.1
TIGR:cd03213	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:549139397..549144714

Molecular Weight (calculated)

83479.3 Da

IEP (calculated)

9.386

GRAVY (calculated)

0.010

Length

760 amino acids

Sequence
(BLAST)

001: MDSIMERPMV DGNGGTIGRS KSDQLPPAPA SASTAQSLSR TASAETVLST ADVTSLSRKS SFGKRSASGG SGAGGNSHGR SHIRKSRSAQ LKLDMEDLVS
101: SGAALSRASS ASLGFSFTFT GFTPPPRDMM SSAELAPFSD DDVDLEAADT TRRKSLMAEP TLPIYLKFSE VKYRVAVKGT PREILSGISG SASPGEVLAM
201: MGPSGSGKTT LLSMLGGRAT AADGCISYND EPFGKSLKRR IGFVTQDDVL FTHLTVKETL TYAALLRLPR TMTREQKKER AMDIIYELGL ERCQDTMIGG
301: SFVRGVSGGE RKRVCIGNEI IINPSLLFLD EPTSGLDSTT ALRIVQLLHD IAETGKTVIT TIHQPSSRLF HKFDKLILLG RGSLLYFGKT AEAMPYFSSI
401: GCNPLIAMNP AEFLLDLANG NTNDVSVPSE LDDKVHMENQ NLQDTNSKIN LRPSAQDVHE YLVDAYEHRV AYKEKKKLLA PLPISDDMKA TITSSKREWG
501: TNWCQQYSIL FCRGLKERRH DYLSWMRITQ VIATSIILGL LWWHSDPTTP KGLQDQAGLL FFIAVFWGFF PVFTAIFTFP QERAMLNKER AADMYKLSAY
601: FLARTTSDLP LDLFLPVIFM VIVYFMAGLK ASAMRFFLSM LTVFLSIIAA QGLGLAIGAT LLDIKKATTL ASVTVMTFML AGGFFVKRVP PFISWLRYLS
701: FNYHTYRLLL KVQYDPVPDI LMTSVPLDNG VTEVGALVAM IIGYRVLAYL SLRRVKASNG

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.