Factsheet for Bra033441.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23205	Canola	plastid	62.72	96.6
CDX95330	Canola	plastid	59.81	91.73
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.64	66.94
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.9	66.89
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.37	66.71
KRH68048	Soybean	plastid	43.37	66.35
Solyc01g006720.2.1	Tomato	plastid	41.96	65.61
Bra009203.1-P	Field mustard	plasma membrane	43.64	65.43
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.46	65.43
PGSC0003DMT400054994	Potato	plastid	41.78	65.15
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	40.72	61.96
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	40.19	60.42
EER92832	Sorghum	plasma membrane	40.55	60.16
TraesCS4D01G271500.1	Wheat	plastid	39.58	59.57
HORVU4Hr1G072620.1	Barley	plastid	39.75	59.45
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	40.37	59.27
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	39.75	59.21
TraesCS4A01G032900.1	Wheat	plastid	39.66	58.92
GSMUA_Achr6P23160_001	Banana	plastid	38.16	58.78
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	36.84	58.32
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.88	45.92
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	25.8	45.55
Bra019051.1-P	Field mustard	plasma membrane	25.53	45.37
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.5	44.91
Bra025152.1-P	Field mustard	plastid	18.55	42.42
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.09	41.7
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.29	41.6
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.67	41.23
Bra007999.1-P	Field mustard	plasma membrane	23.85	40.97
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.06	40.58
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.34	29.27
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	14.66	28.23
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.7	27.04
Bra005051.1-P	Field mustard	plastid	14.58	26.87
Bra013916.1-P	Field mustard	plastid	13.52	26.7
Bra002234.1-P	Field mustard	cytosol	11.31	26.67
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.61	26.59
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	16.96	26.45
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.43	26.27
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.25	25.92
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.34	25.87
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.78	25.61
Bra022614.1-P	Field mustard	plastid	13.07	25.13
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.43	25.0
Bra014774.1-P	Field mustard	plasma membrane	13.52	24.17
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	14.66	22.52
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	17.31	20.72
Bra005049.1-P	Field mustard	plasma membrane	4.77	18.18
Bra014776.1-P	Field mustard	cytosol	16.25	14.33

Protein Annotations

KEGG:00500+3.1.3.24	MapMan:24.1.3.2.2	MapMan:3.1.2.8	Gene3D:3.40.50.1000	Gene3D:3.40.50.300	Gene3D:3.90.1070.10
InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra033441	EnsemblPlants:Bra033441.1
EnsemblPlants:Bra033441.1-P	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005975	GO:GO:0005986	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016787
GO:GO:0016887	GO:GO:0050307	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR003439
InterPro:IPR023214	UniProt:M4EXA5	InterPro:NTF2-like_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
PFAM:PF05116	PFAM:PF08472	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF286
SMART:SM00382	InterPro:SPP_C	InterPro:SPP_N	SUPFAM:SSF52540	SUPFAM:SSF54427	SUPFAM:SSF56784
InterPro:Sucrose_phosphatase_pln/cyn	TIGRFAMs:TIGR01482	TIGRFAMs:TIGR01484	TIGRFAMs:TIGR01485	TMHMM:TMhelix	UniParc:UPI000254384D
SEG:seg	:	:	:	:	:

Description

AT3G52310 (E=0.0) | ABC transporter family protein

Coordinates

chrA04:-:4220246..4230333

Molecular Weight (calculated)

127347.0 Da

IEP (calculated)

6.650

GRAVY (calculated)

-0.199

Length

1132 amino acids

Sequence
(BLAST)

0001: MEMGTSSSSS GLVKAKSETL SEALKSSSLD FSNGGGSSHG RKQHVRASSS PSQSGISNYR RNTHIRKAKT LDLGRLTGGE ALSRASSASL GLSFSFTGFA
0101: VPHEEEIIPS ERSCSNDDNL EDIEAATSSV VKLPEEPTFP IYLKFIDITY KVTCKAMTSS SEKSILNGIS GSAYPGELLA LMGPSGSGKT TLLNVLGGRF
0201: NQQNTSGSVS YNDKPFSKHL KSRIGFVTQD DVLFPHLTVK ETLTYTALLR LPKTLTKQEK EQRAVSVIQE LGLERCQDTM IGGSFVRGVS GGERKRVCIG
0301: NEIMTNPSLL FLDEPTSCLD STTALKIVQM LQSIAKAGKT IVTTIHQPSS RLFHRFDKLV VLSRGSLLYF GKASEAMPYF SSIGCSPLLS MNPAEFLLDL
0401: ANGNMNDISI PSALKEVSSC SKIRPPKSTP TAVYEYLEEA YKTQIEAKEK KKLMEPVPLD EEVKLMITCP KREWGLSWWD QYCILSLRGF KERKHDYFSW
0501: LRVTQVLSTA IILGLLWWQS DIQHPKGLQD QVGLLFFIAV FWGFFPVFTA IFTFPQERAM LSKERESNIY RLSAYFVART TSDLPLDLIL PVLFLVVVYF
0601: MAGLRLRAES FFLSVLTVFL CIVAAQGLGL AIGASLMDLK KATTLASVTV MTFMLAGGYF VKKVPMFIAW IRYMSFNYHT YKLLVKVQYE EIMQDVNGEE
0701: IDTENMLIME RLKSPPPLMI VSDLDHTMVD HQDHDNLSLL RFNSLWEEAY RRDSLLVFST ARSPILYKEL RKEKPLLTPD IIITSIGTEI AFGNSMVPDH
0801: SWVETLNTHK WNQEIVLEET RKFPELTLQP KTEQRLHKVS FYIDEGKGEA VTKELSHLLE KRGLDVKIIH SWGMNLDVIP RGGGKGEALE YLLKKLKAEG
0901: MSPVNTLACG DSEHDAELFS IPDVHGVMVS NSQEELLKWH TENALNNSKL IHSSERCADG ILQAIDYFKL GPTLSPRDAS EFLNGKADIA NPGQEVVRFY
1001: LFYERLRRGE IKKYETYIAS FKESCDQDAV FFHPSGEEKS LREAIDELRK YNGDRSGKKF WVWVDQVLVI DNISGKCIVK FDKWEQCEDE RKCCTTTVEF
1101: TSKGKGCLVW EQVKQIWSEE SELNDENNCW II

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.