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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:plastid
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76122 Canola plasma membrane 99.38 99.53
Bra005049.1-P Field mustard plasma membrane 20.25 87.54
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 49.53 86.41
Bra005051.1-P Field mustard plastid 40.97 85.67
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 46.57 80.38
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 41.12 72.73
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 39.8 70.58
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 40.73 70.01
KRG92984 Soybean cytosol, peroxisome, plasma membrane 40.58 69.47
Solyc05g054890.2.1 Tomato cytosol 40.26 68.93
PGSC0003DMT400029838 Potato extracellular 37.07 68.49
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 38.55 68.37
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 38.16 68.25
Solyc04g010210.1.1 Tomato extracellular 37.38 67.23
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 35.28 64.16
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 37.07 64.15
GSMUA_Achr5P28450_001 Banana plasma membrane 34.58 63.61
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 34.5 62.66
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 34.42 62.43
Os05t0120200-01 Rice plasma membrane 33.88 62.23
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 32.94 62.11
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 33.72 61.95
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 35.9 61.88
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.79 61.82
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 35.75 61.78
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.71 61.67
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 33.33 61.67
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 34.27 61.54
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 37.85 61.52
EES18923 Sorghum cytosol, peroxisome, plasma membrane 34.19 61.48
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 36.22 61.43
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 36.22 61.43
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 33.96 61.41
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.55 61.38
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 33.02 61.27
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 36.06 61.24
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 36.06 61.24
Os05t0120000-00 Rice plasma membrane 32.4 61.18
Os01t0836600-01 Rice plasma membrane 35.67 61.15
EER95064 Sorghum cytosol, peroxisome, plasma membrane 37.85 61.06
TraesCS3B01G387500.1 Wheat plastid 35.98 61.03
Zm00001d035553_P001 Maize plasma membrane 33.88 60.92
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 33.18 60.86
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 31.54 60.63
Zm00001d042953_P001 Maize plasma membrane 35.83 60.45
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 33.49 60.39
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 37.15 60.23
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 37.23 60.05
EES17614 Sorghum cytosol, peroxisome, vacuole 33.1 59.86
Os03t0281900-01 Rice cytosol, plasma membrane 36.6 59.72
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 30.84 58.67
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 38.01 58.03
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 30.45 57.93
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 35.59 57.92
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 36.84 50.0
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 34.58 49.39
Bra014774.1-P Field mustard plasma membrane 23.44 47.55
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 23.36 45.73
HORVU4Hr1G058070.2 Barley cytosol 28.74 45.28
HORVU5Hr1G021110.1 Barley cytosol 13.79 41.26
Bra030948.1-P Field mustard cytosol, peroxisome, plasma membrane 16.51 36.05
Os03t0282100-00 Rice cytosol, nucleus, plastid 21.42 35.9
Bra002234.1-P Field mustard cytosol 13.16 35.21
Bra022614.1-P Field mustard plastid 15.73 34.3
Bra013141.1-P Field mustard cytosol, peroxisome, plasma membrane 16.82 34.18
Bra013916.1-P Field mustard plastid 15.19 34.03
GSMUA_Achr6P08820_001 Banana plasma membrane 31.85 33.09
Bra016095.1-P Field mustard cytosol, peroxisome, plasma membrane 15.34 29.8
Bra003903.1-P Field mustard cytosol, peroxisome, plasma membrane 14.88 29.38
Bra007999.1-P Field mustard plasma membrane 14.88 28.98
Bra019051.1-P Field mustard plasma membrane 14.1 28.41
Bra033878.1-P Field mustard cytosol, peroxisome, plastid 13.94 27.93
Bra026352.1-P Field mustard cytosol, peroxisome, plasma membrane 13.86 27.9
Bra025152.1-P Field mustard plastid 10.12 26.26
Bra026514.1-P Field mustard cytosol, peroxisome, plasma membrane 13.63 26.2
Bra009203.1-P Field mustard plasma membrane 15.26 25.96
Bra039378.1-P Field mustard cytosol, peroxisome, plasma membrane 13.71 25.84
Bra028729.1-P Field mustard cytosol, peroxisome, plasma membrane 15.03 25.66
Bra023202.1-P Field mustard cytosol, peroxisome, plasma membrane 13.79 24.35
Bra014326.1-P Field mustard cytosol, peroxisome, plasma membrane 13.32 23.2
Bra033441.1-P Field mustard plastid 14.33 16.25
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra014776EnsemblPlants:Bra014776.1EnsemblPlants:Bra014776.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887InterPro:IPR003439UniProt:M4DE57InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0002544CF5SEG:seg:::
Description
AT3G55090 (E=0.0) | ATPase, coupled to transmembrane movement of substances
Coordinates
chrA04:+:3021534..3027835
Molecular Weight (calculated)
143153.0 Da
IEP (calculated)
9.371
GRAVY (calculated)
0.103
Length
1284 amino acids
Sequence
(BLAST)
0001: MLQQDAVISV HSPGTRPLPL VLAFNDLTYK VTLPRRFGFR FRRSPAQVKT LLNGITGETN EGEILAILGA SGSGKSTLID ALAGRISEGS LKGKVTLNGE
0101: ALQSRMLQVI SAYVMQDDLL FPMLTVQETL MFAAEFRLPR SLPKSKKRDR VETLIDQLGL RTVKNTMIGD EGHRGVSGGE RRRVSIGTDI IHDPIVLFLD
0201: EPTSGLDSTC AFMVVQVLKQ IACSGSIVVM SIHQPSCRIM ELLDRLLVLS SGQCVFSDSP ATLPLFFSEF GRPIPDKENN AEFTLDLIKD LEGTSGGTSR
0301: LVEFNRSWQQ KKLRVSQEPH HNSSPLRETI NASITRGKLV TTSYNSKASY VNPWWVETLI LAKRYMINWT RTPELIGTRV FIVMMTGFLL ATVYWRVDDS
0401: PRGVQERLSF FSFAMATMFY SCADGLPTFI QERYIFMRET AHNAYRRSSY VISHSLVTLP HLFALSVGFA ATTFWFVGLN GGLAGFIYYL LIIFASFWSG
0501: CSFVTFVSGV IPNVMMSYMV TFGYLSYCLL FSGFYINRDR IHLYWIWIHY ISLLKYPYEA VLHNEFDDPS LSEDHSVDNA TPYHSMEIGS SLTLGQLLKN
0601: VSDVRKVDAG DETPLHSSQG DQDYDDLMRP VPFVLSFNNL TYNVSVRRKF NLIPRRSLSS SKTKTLLDNI SGETRDGEIL AVLGASGSGK STLIDALANR
0701: IAKGSLKGKV TLNGEPLQSR TLKVISAYVM QDDLLFPMLT VEETLMFAAE FRLPRSLPKS KKKLRVQTLI EQLGIKNAAN TIIGDEGHRG ISGGERRRVS
0801: IGIDIIHDPI VLFLDEPTSG LDSTSAFMVV NVLKKIAESG SIVIMSIHQP SHRVLGLLNR LIFLSRGKTV FSGSPASLPG FFARFGSPVP ENENQTEFAL
0901: DLIRELEGSA GGTRGLVEFN KRWQEMKNRS PPASPNPNLT LKEAISASIS RGKLVSGGGG GGGSSVVSHG GFANPFWIEI KTLTERSILN SRRQPELFGT
1001: RLAAVLVTGF ILATVFWRLD NSPKGVQERL GFFAFAMSTM FYTCADALPV FLQERYIFMR ETAYNAYRRS SYVLSHAVVS LPSLVFLSLA FASTTFWAVG
1101: LEGGPMGFLF YCLIIFASFW SGSSFVTFLS GVVPHVMLGY TIVVAILAYF LLFSGFFINR DRIPQYWLWF HYLSLVKYPY EAVLQNEFSD PMECFVRGVQ
1201: MFDNTPLGQL SYGMKLRLLD SVSRSIGMRI TSSTCLTTGA DILRQQGVTE LSKWSCLLVT VGFGFFFRAL FYLCLLFGSK NKRR
Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.