Factsheet for TraesCS3B01G047600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome, vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	96.15	96.15
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	90.37	91.32
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	77.78	77.09
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	77.19	75.07
Os05t0120000-00	Rice	plasma membrane	72.3	71.76
CDY44641	Canola	plasma membrane	28.15	63.97
Bra005049.1-P	Field mustard	plasma membrane	28.15	63.97
Bra005051.1-P	Field mustard	plastid	54.67	60.1
CDX74853	Canola	plastid	54.67	59.81
TraesCS3B01G387500.1	Wheat	plastid	62.96	56.14
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	59.11	55.11
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	53.93	54.98
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	58.67	54.55
CDY02907	Canola	cytosol, peroxisome, plasma membrane	51.26	54.49
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	57.93	54.46
PGSC0003DMT400029838	Potato	extracellular	56.0	54.39
CDX69629	Canola	plastid	58.52	54.26
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	58.37	54.2
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	58.07	54.14
KRH67592	Soybean	plastid	58.67	53.95
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	58.67	53.8
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	58.52	53.67
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	59.26	53.55
Solyc04g010210.1.1	Tomato	extracellular	56.44	53.36
AT3G53510.1	Thale cress	plasma membrane	58.37	53.32
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	55.85	53.25
AT2G39350.1	Thale cress	cytosol	58.37	53.24
CDX76119	Canola	cytosol, peroxisome, plasma membrane	52.59	53.22
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	57.78	52.99
Solyc05g054890.2.1	Tomato	cytosol	58.81	52.93
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	58.22	52.82
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	58.52	52.67
CDY09810	Canola	plastid	58.52	52.53
CDX93388	Canola	plasma membrane	57.63	52.5
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.63	52.43
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.81	52.33
CDX67624	Canola	cytosol, peroxisome, plasma membrane	54.81	52.33
CDY18451	Canola	cytosol, peroxisome, plasma membrane	57.48	52.29
CDX76121	Canola	cytosol	36.44	52.23
Solyc09g005970.1.1	Tomato	plasma membrane	57.04	52.17
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.52	51.83
CDX73549	Canola	cytosol, peroxisome, plasma membrane	57.93	51.72
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.22	51.69
CDY40201	Canola	cytosol	54.22	51.69
PGSC0003DMT400061466	Potato	plasma membrane	56.74	51.69
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	57.78	51.66
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.33	51.5
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	54.96	51.17
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	59.26	50.51
CDY65003	Canola	cytosol, peroxisome, plasma membrane	53.19	50.28
CDY37656	Canola	cytosol, peroxisome, plasma membrane	52.89	50.07
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.04	50.07
CDX73404	Canola	plasma membrane	54.67	46.77
CDY50899	Canola	cytosol	20.59	41.74
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.93	41.33
Bra014774.1-P	Field mustard	plasma membrane	36.89	39.34
TraesCS3B01G251300.1	Wheat	plastid	33.33	37.19
TraesCS3B01G285600.1	Wheat	cytosol, peroxisome, plasma membrane	39.26	37.11
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	33.04	34.15
TraesCS2B01G612200.1	Wheat	plasma membrane	31.7	31.7
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	30.96	31.57
TraesCS5B01G203200.1	Wheat	cytosol	40.3	31.23
CDX76122	Canola	plasma membrane	58.67	30.89
Bra014776.1-P	Field mustard	cytosol	58.67	30.84
CDY02906	Canola	plasma membrane	58.37	30.66
TraesCS4B01G095200.1	Wheat	plastid	26.96	28.26
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	27.56	26.84
TraesCS3B01G017100.1	Wheat	extracellular, plasma membrane, vacuole	24.3	24.7
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	27.11	24.08

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF294	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G047600	EnsemblPlants:TraesCS3B01G047600.1	SEG:seg	:

Description

No Description!

Coordinates

chr3B:-:24017309..24019336

Molecular Weight (calculated)

72852.0 Da

IEP (calculated)

9.641

GRAVY (calculated)

0.344

Length

675 amino acids

Sequence
(BLAST)

001: MASSGHMVVG VGGPDEQEPV PVPYVLSFTD LCYGVNKRRG GMVGCLPSRG RNQIANTNTK ALLDGISGEA REGELFAVMG ASGAGKSTLL DALAGRITRA
101: SLRGGVTLNG EPLTNGRLRA ISAYVMQDDL LYPMLTVRET LLFAAEFRLP RALSAATKRD RVDALIRQLG LSGAADTVVV DETHRGVSGG ERRRVSIGAD
201: IIHDPILLFL DEPTSGLDST SAFMVVQVLR DIARSGSVVV MTIHQPSARI LGILGRLLLL SRGRAVYAGT PAGLKPFFSE LSTPVPDNEN PAEFALDTIR
301: DLERQPDGAA KLADFNARWH GDTIGKVSST VMSLELAVAE SVSRGKLSRL IESTAGTVGM PTYANPLALE VWVLSKRSFI NFRRMPELFA LRLGTLMVTG
401: LVLATIFFRL DDTPRGVKER LGFFAMGMTT MFYVSAGTLP VFIQERHVYL RETEHNAYRR ISYVLASSAV FFPPLVILCL AFAATTFFAV GLAGGGASFG
501: FFVLTVLASL WAGSGFVTFL SAVVPHVMLG YTVVVAVLAY FLLLSGFFIS RDRIPGYWMW LHYMSLVKYP YQALVQNEFG DATRCFARGI QVFDGTPVGG
601: LSEAVKVKVL GAISAALGTN VTASTCLLTG ADVLRQQAVT DLGKWSCLLV TAAFGFFFRA LFYVVLLVGS KNKRR

Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)

001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK

Arabidopsis Description

ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.