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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 99.46 99.46
CDX93388 Canola plasma membrane 97.98 98.11
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 84.77 83.31
CDY44641 Canola plasma membrane 30.46 76.09
CDX73549 Canola cytosol, peroxisome, plasma membrane 77.36 75.93
CDX74853 Canola plastid 60.38 72.61
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 70.08 70.65
KRH67592 Soybean plastid 69.54 70.3
KRG95875 Soybean cytosol, peroxisome, plasma membrane 69.14 69.7
CDX69629 Canola plastid 66.98 68.27
Solyc09g005970.1.1 Tomato plasma membrane 66.58 66.94
PGSC0003DMT400061466 Potato plasma membrane 66.85 66.94
CDY09810 Canola plastid 67.12 66.22
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 61.99 65.16
GSMUA_Achr5P28450_001 Banana plasma membrane 59.97 63.75
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 62.4 61.16
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 62.4 61.16
CDY02907 Canola cytosol, peroxisome, plasma membrane 52.16 60.94
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 61.86 60.71
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 61.73 60.58
Os05t0120200-01 Rice plasma membrane 57.01 60.52
TraesCS3B01G387500.1 Wheat plastid 61.73 60.5
CDX76121 Canola cytosol 38.27 60.3
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 60.24 60.16
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.12 60.06
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.99 59.91
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 60.11 59.87
Os05t0120000-00 Rice plasma membrane 54.85 59.85
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 63.61 59.75
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 55.66 59.68
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 55.8 59.65
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 54.58 59.47
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.58 59.47
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 63.34 59.34
EER95064 Sorghum cytosol, peroxisome, plasma membrane 63.48 59.17
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 63.48 59.17
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 53.23 59.13
CDY40201 Canola cytosol 56.33 59.04
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 55.66 59.0
CDX67624 Canola cytosol, peroxisome, plasma membrane 56.2 58.98
EES18923 Sorghum cytosol, peroxisome, plasma membrane 56.74 58.96
Os01t0836600-01 Rice plasma membrane 59.03 58.48
CDX76119 Canola cytosol, peroxisome, plasma membrane 52.56 58.47
EES17614 Sorghum cytosol, peroxisome, vacuole 55.66 58.17
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 55.8 58.15
Zm00001d042953_P001 Maize plasma membrane 59.57 58.08
Os03t0281900-01 Rice cytosol, plasma membrane 61.32 57.81
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 52.29 57.48
Zm00001d035553_P001 Maize plasma membrane 55.26 57.42
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 52.02 57.19
CDY65003 Canola cytosol, peroxisome, plasma membrane 54.18 56.3
CDY37656 Canola cytosol, peroxisome, plasma membrane 53.77 55.96
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 63.21 55.77
CDY50899 Canola cytosol 24.26 54.05
CDX73404 Canola plasma membrane 56.47 53.11
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 55.53 52.22
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 61.59 50.83
HORVU4Hr1G058070.2 Barley cytosol 48.11 43.8
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 38.27 43.29
HORVU5Hr1G021110.1 Barley cytosol 23.32 40.33
CDX76122 Canola plasma membrane 64.29 37.21
CDY02906 Canola plasma membrane 64.42 37.2
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.79 35.64
CDY02516 Canola cytosol, peroxisome, plasma membrane 27.9 35.2
CDY59400 Canola cytosol, plasma membrane, plastid 27.49 34.69
CDX89610 Canola cytosol, peroxisome, plasma membrane 28.03 34.38
CDY13996 Canola plasma membrane 22.1 34.24
CDX93119 Canola cytosol, peroxisome, plasma membrane 27.9 34.21
CDX96366 Canola cytosol 16.85 33.88
CDX94418 Canola plastid 25.07 32.46
CDY27043 Canola plastid 25.74 32.43
GSMUA_Achr6P08820_001 Banana plasma membrane 53.91 32.36
CDX89396 Canola plasma membrane 24.93 32.29
CDY36670 Canola cytosol 15.63 31.96
CDX92533 Canola plastid 26.82 31.64
CDX96159 Canola plastid 25.07 31.58
CDX68292 Canola cytosol, peroxisome, plasma membrane 24.93 28.46
CDX72849 Canola cytosol, peroxisome, plasma membrane 25.2 27.42
CDY03668 Canola plasma membrane 24.93 26.97
CDY47690 Canola cytosol, peroxisome, plastid 23.18 26.83
CDY50951 Canola cytosol, peroxisome, plastid 23.18 26.83
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 24.66 26.75
CDY04991 Canola plastid 25.88 26.74
CDY51602 Canola plastid 23.99 26.73
CDY46506 Canola cytosol, peroxisome, plasma membrane 23.85 26.5
CDY48079 Canola plastid 23.58 26.32
CDX70095 Canola plastid 25.47 26.21
CDX92829 Canola plasma membrane 22.64 26.09
CDY29837 Canola plasma membrane 22.64 26.09
CDY49155 Canola cytosol, peroxisome, plasma membrane 22.78 26.04
CDY29304 Canola cytosol, peroxisome, plasma membrane 22.37 26.02
CDX89252 Canola cytosol, peroxisome, plasma membrane 22.24 25.86
CDX99764 Canola cytosol, peroxisome, plasma membrane 23.72 25.69
CDX95330 Canola plastid 25.47 25.61
CDY23205 Canola plastid 25.34 25.58
CDY14079 Canola plasma membrane 25.88 25.53
CDY24203 Canola peroxisome 23.32 25.4
CDY43362 Canola cytosol, peroxisome, plasma membrane 23.18 25.26
CDX98933 Canola plasma membrane 25.47 25.03
CDY12299 Canola cytosol, peroxisome, plasma membrane 22.64 23.6
CDY37372 Canola cytosol, peroxisome, plasma membrane 22.91 23.19
CDY40385 Canola cytosol, peroxisome, plasma membrane 22.91 23.07
CDY12359 Canola cytosol, nucleus, plasma membrane 8.63 21.26
CDY36671 Canola plasma membrane 9.57 20.52
CDX96365 Canola plasma membrane 10.51 20.21
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078FZI0UniProt:A0A078FZI0InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY18451ProteinID:CDY18451ProteinID:CDY18451.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00005450001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF428
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDB396SEG:seg:
Description
BnaA04g21360DBnaA04g21360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZI0]
Coordinates
chrLK032085:+:552859..555087
Molecular Weight (calculated)
82132.6 Da
IEP (calculated)
9.480
GRAVY (calculated)
0.148
Length
742 amino acids
Sequence
(BLAST)
001: MSGFLGKLSP TKRVVAGNNN DLPLFYSNSM ERCPRDTPRV TATLGELLMN VDDASNDHRG LEMASPLTSS ASSFNSWTSA PASSITSSPF VLSFTDLTYS
101: VKIKKKFPPF FGNSSSNDSA LNTKILLNSI SGEAHEGEMM AVLGASGSGK STLIDALANR IAKDSLRGSI TLNGEVLESS LQKVISAYVM QDDLLFPMLT
201: VEETLMFSAE FRLPRSLSKK KKKARVQSLI DQLGLRSAAR TMIGDEGHRG ISGGERRRVS IGIDIIHDPI ILFLDEPTSG LDSTSAYMVI KVLQRIAQSG
301: SIVIMSIHQP SYRIMGLLDR LIFLSRGNTV FSGSPTYLPQ FFSEFDHPIP ENENKTEFAL DLIRELENSP EGTKKLVEYH KEWRAKQQAA ARYYNNGITL
401: KEAITASISK GKLVSGAATT TTSPSSFQTY ANPFWIEMIV IGKRSILNSM RQPELIGMRI GAVMVTGIIL ATMFTKLDNS PKGVQERLGF FAFAMSTTFY
501: TCAEAIPVFL QERYIFMRET AYNAYRRSSY VLSQSIISIP SLIFLAACFA ATTFFAVGLA GGASGFLFFF LTILASFWAG SSFVTFLSGV VSNVMLGFTV
601: VVAILAYFLL FSGFFISRDR IPLYWIWFHY LSLVKYPYEG VLQNEFEDTT KCFVRGIQIF DNSPLGQFPN AVKLSLLKSM SGVLGINVTA ETCVTTGIDI
701: LKQQGVTEIS KWNCLWITVA WGFFFRVLFY FTLLIGSKNK RR
Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)
001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK
Arabidopsis Description
ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.