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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93388 Canola plasma membrane 83.84 85.43
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 83.58 85.04
CDY18451 Canola cytosol, peroxisome, plasma membrane 83.31 84.77
AT3G53510.1 Thale cress plasma membrane 80.79 82.54
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 69.14 70.92
KRG95875 Soybean cytosol, peroxisome, plasma membrane 67.81 69.57
KRH67592 Soybean plastid 67.42 69.35
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 66.36 68.91
Solyc09g005970.1.1 Tomato plasma membrane 65.83 67.34
PGSC0003DMT400061466 Potato plasma membrane 65.83 67.07
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 63.97 65.62
AT2G39350.1 Thale cress cytosol 64.24 65.54
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 58.68 62.75
GSMUA_Achr5P28450_001 Banana plasma membrane 57.62 62.32
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 53.77 61.33
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 59.74 60.7
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 59.87 60.67
Os05t0120200-01 Rice plasma membrane 56.16 60.66
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.7 60.65
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 60.79 60.63
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 60.79 60.63
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.57 60.5
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 54.57 60.5
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 60.4 60.32
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 63.05 60.25
TraesCS3B01G387500.1 Wheat plastid 60.4 60.24
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 60.26 60.19
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 56.42 60.17
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.17 60.06
Os05t0120000-00 Rice plasma membrane 54.04 60.0
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 54.97 59.8
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 54.7 59.68
EES18923 Sorghum cytosol, peroxisome, plasma membrane 56.42 59.66
EER95064 Sorghum cytosol, peroxisome, plasma membrane 62.78 59.55
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 62.38 59.47
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 62.52 59.3
Os03t0281900-01 Rice cytosol, plasma membrane 61.72 59.21
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 54.83 59.14
EES17614 Sorghum cytosol, peroxisome, vacuole 55.5 59.01
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 52.05 58.83
Os01t0836600-01 Rice plasma membrane 58.15 58.61
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 55.1 58.43
Zm00001d042953_P001 Maize plasma membrane 58.81 58.34
Zm00001d035553_P001 Maize plasma membrane 55.1 58.26
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 51.66 57.78
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 51.26 57.33
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 54.97 57.24
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 62.25 55.89
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 54.57 52.22
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 59.21 49.72
HORVU4Hr1G058070.2 Barley cytosol 47.42 43.93
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 37.22 42.84
HORVU5Hr1G021110.1 Barley cytosol 23.84 41.96
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.95 36.42
AT1G53270.1 Thale cress plasma membrane 26.89 34.41
AT2G13610.1 Thale cress cytosol, peroxisome, plasma membrane 28.21 32.82
AT5G52860.1 Thale cress cytosol, nucleus, plasma membrane, plastid 25.17 32.26
AT4G25750.1 Thale cress plasma membrane 24.64 32.24
AT5G19410.2 Thale cress plastid 27.02 32.23
GSMUA_Achr6P08820_001 Banana plasma membrane 52.72 32.2
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 24.5 27.95
AT4G27420.1 Thale cress cytosol, peroxisome, plasma membrane 23.31 27.59
AT3G25620.2 Thale cress cytosol, nucleus, plasma membrane, plastid 23.71 26.64
AT5G06530.1 Thale cress plasma membrane 25.56 25.7
AT1G31770.1 Thale cress cytosol, nucleus, peroxisome 21.59 25.15
AT3G13220.1 Thale cress cytosol, peroxisome, plasma membrane 22.52 24.82
AT2G01320.3 Thale cress peroxisome, plastid, vacuole 22.78 23.63
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:818312UniProt:A0A178VW33InterPro:AAA+_ATPaseProteinID:AAC98055.1
InterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AEC09388.1EMBL:AK117523ArrayExpress:AT2G37360
EnsemblPlantsGene:AT2G37360RefSeq:AT2G37360TAIR:AT2G37360RefSeq:AT2G37360-TAIR-GEnsemblPlants:AT2G37360.1TAIR:AT2G37360.1
Unigene:At.13323GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0010345GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0019748GO:GO:0042626GO:GO:0055085InterPro:IPR003439
RefSeq:NP_181272.1ProteinID:OAP09062.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061PO:PO:0007611
PO:PO:0007616PO:PO:0009005PO:PO:0009032PO:PO:0009046PO:PO:0020100ScanProsite:PS00211
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF428InterPro:Pigment_permease/AbcgUniProt:Q9ZUT0SMART:SM00382
SUPFAM:SSF52540TIGRFAMs:TIGR00955TMHMM:TMhelixUniParc:UPI00000A1BA9SEG:seg:
Description
ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
Coordinates
chr2:-:15673410..15675920
Molecular Weight (calculated)
83460.6 Da
IEP (calculated)
9.625
GRAVY (calculated)
0.038
Length
755 amino acids
Sequence
(BLAST)
001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.