Factsheet for AT4G27420.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89252	Canola	cytosol, peroxisome, plasma membrane	82.76	82.76
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	82.76	82.76
CDY29304	Canola	cytosol, peroxisome, plasma membrane	82.76	82.76
Bra019051.1-P	Field mustard	plasma membrane	82.45	82.57
CDX92829	Canola	plasma membrane	82.76	81.99
CDY29837	Canola	plasma membrane	82.6	81.83
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.38	63.88
PGSC0003DMT400039671	Potato	plasma membrane	53.92	61.87
PGSC0003DMT400049667	Potato	cytosol, peroxisome, plasma membrane	59.4	61.83
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	58.15	60.52
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	58.46	59.39
PGSC0003DMT400039676	Potato	plasma membrane	56.11	56.92
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	56.11	56.83
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	53.92	55.94
GSMUA_Achr2P02720_001	Banana	mitochondrion	50.0	53.61
AT3G25620.2	Thale cress	cytosol, nucleus, plasma membrane, plastid	54.23	51.49
AT1G31770.1	Thale cress	cytosol, nucleus, peroxisome	51.1	50.31
KRH20507	Soybean	cytosol	49.22	49.92
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	46.71	45.02
AT5G06530.1	Thale cress	plasma membrane	46.08	39.15
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	41.07	38.25
AT1G53270.1	Thale cress	plasma membrane	25.71	27.8
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	27.9	26.89
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	29.78	26.13
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	26.33	25.89
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	23.82	25.81
AT4G25750.1	Thale cress	plasma membrane	22.88	25.3
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	28.06	25.28
AT5G19410.2	Thale cress	plastid	24.92	25.12
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	28.21	24.83
AT2G39350.1	Thale cress	cytosol	28.21	24.32
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	28.06	24.32
AT2G01320.3	Thale cress	peroxisome, plastid, vacuole	27.59	24.18
AT3G53510.1	Thale cress	plasma membrane	27.59	23.82
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	27.59	23.31

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:828850	UniProt:A0A178V178	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEE85338.1	ArrayExpress:AT4G27420	EnsemblPlantsGene:AT4G27420	RefSeq:AT4G27420
TAIR:AT4G27420	RefSeq:AT4G27420-TAIR-G	EnsemblPlants:AT4G27420.1	TAIR:AT4G27420.1	Unigene:At.32102	ProteinID:CAB43874.1
ProteinID:CAB81392.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791
GO:GO:0010222	GO:GO:0010588	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0042803	GO:GO:0055085	InterPro:IPR003439	RefSeq:NP_194472.3	ProteinID:OAO98832.1
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PO:PO:0000013	PO:PO:0000014	PO:PO:0000035
PO:PO:0000036	PO:PO:0000039	PO:PO:0003011	PO:PO:0005417	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009049	PO:PO:0020094
PO:PO:0025022	PO:PO:0025029	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF257
UniProt:Q9SZR9	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001E92EFD	SEG:seg

Description

ABCG9ABCG9 [Source:UniProtKB/TrEMBL;Acc:A0A178V178]

Coordinates

chr4:-:13712199..13714797

Molecular Weight (calculated)

70757.5 Da

IEP (calculated)

9.599

GRAVY (calculated)

0.092

Length

638 amino acids

Sequence
(BLAST)

001: MDNQEVSMDV ETPIAKTNDD RSLPFSIFKK ANNPVTLKFE NLVYTVKLKD SQGCFGKNDK TEERTILKGL TGIVKPGEIL AMLGPSGSGK TSLLTALGGR
101: VGEGKGKLTG NISYNNKPLS KAVKRTTGFV TQDDALYPNL TVTETLVFTA LLRLPNSFKK QEKIKQAKAV MTELGLDRCK DTIIGGPFLR GVSGGERKRV
201: SIGQEILINP SLLFLDEPTS GLDSTTAQRI VSILWELARG GRTVVTTIHQ PSSRLFYMFD KLLLLSEGNP VYFGLGSNAM DYFASVGYSP LVERINPSDF
301: LLDIANGVGS DESQRPEAMK AALVAFYKTN LLDSVINEVK GQDDLCNKPR ESSRVATNTY GDWPTTWWQQ FCVLLKRGLK QRRHDSFSGM KVAQIFIVSF
401: LCGLLWWQTK ISRLQDQIGL LFFISSFWAF FPLFQQIFTF PQERAMLQKE RSSGMYRLSP YFLSRVVGDL PMELILPTCF LVITYWMAGL NHNLANFFVT
501: LLVLLVHVLV SGGLGLALGA LVMDQKSATT LGSVIMLTFL LAGGYYVQHV PVFISWIKYV SIGYYTYKLL ILGQYTANEL YPCGDNGKLR CHVGDFEGIK
601: HIGFNSGLVS ALALTAMLVV YRVIAYIALT RIGKTKSG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.