Factsheet for AT3G55130.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76119	Canola	cytosol, peroxisome, plasma membrane	79.17	86.06
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	83.59	85.35
CDY65003	Canola	cytosol, peroxisome, plasma membrane	81.52	82.77
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	81.1	82.24
CDY37656	Canola	cytosol, peroxisome, plasma membrane	80.83	82.19
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	78.21	80.08
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	64.0	70.09
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	61.24	61.07
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	61.52	60.6
AT2G39350.1	Thale cress	cytosol	61.1	59.86
Bra014774.1-P	Field mustard	plasma membrane	51.59	59.08
GSMUA_Achr5P28450_001	Banana	plasma membrane	54.34	56.45
Os05t0120200-01	Rice	plasma membrane	54.21	56.22
Os05t0120000-00	Rice	plasma membrane	52.69	56.18
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	52.41	55.8
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	52.41	55.8
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	51.31	55.69
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	52.28	55.65
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	52.14	55.51
AT3G53510.1	Thale cress	plasma membrane	56.55	55.48
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	53.66	55.1
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	57.24	54.97
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	51.17	54.96
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	54.07	54.9
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	51.03	54.81
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	52.28	54.77
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	52.14	54.47
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	53.38	54.35
EES17614	Sorghum	cytosol, peroxisome, vacuole	53.1	54.23
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	52.14	54.0
Zm00001d035553_P001	Maize	plasma membrane	52.69	53.5
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	57.66	52.91
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	53.93	52.62
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	53.66	52.21
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	57.1	52.01
TraesCS3B01G387500.1	Wheat	plastid	54.21	51.92
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	54.07	51.85
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	54.07	51.85
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	54.07	51.78
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	54.07	51.78
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	56.28	51.52
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	56.55	51.51
Os01t0836600-01	Rice	plasma membrane	53.1	51.4
Zm00001d042953_P001	Maize	plasma membrane	53.24	50.72
Os03t0281900-01	Rice	cytosol, plasma membrane	54.9	50.57
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	56.28	48.51
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	52.0	47.78
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	53.38	43.05
HORVU5Hr1G021110.1	Barley	cytosol	23.86	40.33
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	36.41	40.24
HORVU4Hr1G058070.2	Barley	cytosol	42.76	38.04
AT1G53270.1	Thale cress	plasma membrane	27.86	34.24
Os03t0282100-00	Rice	cytosol, nucleus, plastid	35.86	33.94
AT4G25750.1	Thale cress	plasma membrane	26.34	33.1
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	26.76	32.94
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	28.69	32.05
AT5G19410.2	Thale cress	plastid	27.86	31.91
GSMUA_Achr6P08820_001	Banana	plasma membrane	50.9	29.85
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	26.07	28.55
AT4G27420.1	Thale cress	cytosol, peroxisome, plasma membrane	24.83	28.21
AT3G25620.2	Thale cress	cytosol, nucleus, plasma membrane, plastid	25.79	27.83
AT1G31770.1	Thale cress	cytosol, nucleus, peroxisome	24.41	27.31
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	23.59	24.96
AT5G06530.1	Thale cress	plasma membrane	25.38	24.5
AT2G01320.3	Thale cress	peroxisome, plastid, vacuole	24.14	24.04

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:824679	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:AEE79343.1	ArrayExpress:AT3G55130	EnsemblPlantsGene:AT3G55130	RefSeq:AT3G55130	TAIR:AT3G55130
RefSeq:AT3G55130-TAIR-G	EnsemblPlants:AT3G55130.1	TAIR:AT3G55130.1	Symbol:ATWBC19	EMBL:AY045932	EMBL:AY079387
Unigene:At.1136	ProteinID:CAB75747.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005775	GO:GO:0005886	GO:GO:0006810	GO:GO:0007034
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0042891	GO:GO:0055085	InterPro:IPR003439	RefSeq:NP_191073.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	UniProt:Q9M3D6	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00000A7A62	SEG:seg	:	:

Description

ABCG19ABC transporter G family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3D6]

Coordinates

chr3:-:20433839..20436453

Molecular Weight (calculated)

80661.6 Da

IEP (calculated)

8.490

GRAVY (calculated)

0.095

Length

725 amino acids

Sequence
(BLAST)

001: MNLSLSGRKI AMTRVSAETQ YITPIGSPTL DELLKDCDSF RKGDSGDGVK SDDPAHHIID VEALYVKPVP YVLNFNNLQY DVTLRRRFGF SRQNGVKTLL
101: DDVSGEASDG DILAVLGASG AGKSTLIDAL AGRVAEGSLR GSVTLNGEKV LQSRLLKVIS AYVMQDDLLF PMLTVKETLM FASEFRLPRS LSKSKKMERV
201: EALIDQLGLR NAANTVIGDE GHRGVSGGER RRVSIGIDII HDPIVLFLDE PTSGLDSTNA FMVVQVLKRI AQSGSIVIMS IHQPSARIVE LLDRLIILSR
301: GKSVFNGSPA SLPGFFSDFG RPIPEKENIS EFALDLVREL EGSNEGTKAL VDFNEKWQQN KISLIQSAPQ TNKLDQDRSL SLKEAINASV SRGKLVSGSS
401: RSNPTSMETV SSYANPSLFE TFILAKRYMK NWIRMPELVG TRIATVMVTG CLLATVYWKL DHTPRGAQER LTLFAFVVPT MFYCCLDNVP VFIQERYIFL
501: RETTHNAYRT SSYVISHSLV SLPQLLAPSL VFSAITFWTV GLSGGLEGFV FYCLLIYASF WSGSSVVTFI SGVVPNIMLC YMVSITYLAY CLLLSGFYVN
601: RDRIPFYWTW FHYISILKYP YEAVLINEFD DPSRCFVRGV QVFDSTLLGG VSDSGKVKLL ETLSKSLRTK ITESTCLRTG SDLLAQQGIT QLSKWDCLWI
701: TFASGLFFRI LFYFALLFGS RNKRT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.