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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 96.7 90.85
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 86.06 79.17
CDY65003 Canola cytosol, peroxisome, plasma membrane 82.16 76.75
CDY37656 Canola cytosol, peroxisome, plasma membrane 81.71 76.44
CDX76121 Canola cytosol 52.17 73.89
CDY02907 Canola cytosol, peroxisome, plasma membrane 69.72 73.23
CDX67624 Canola cytosol, peroxisome, plasma membrane 76.91 72.56
CDY40201 Canola cytosol 76.61 72.18
CDX73404 Canola plasma membrane 78.11 66.03
CDX74853 Canola plastid 57.72 62.4
CDX69629 Canola plastid 63.57 58.24
CDY44641 Canola plasma membrane 25.49 57.24
CDY09810 Canola plastid 63.72 56.52
GSMUA_Achr5P28450_001 Banana plasma membrane 56.82 54.3
Os05t0120200-01 Rice plasma membrane 56.37 53.79
Os05t0120000-00 Rice plasma membrane 54.72 53.68
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 55.77 53.6
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 55.47 53.47
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 53.52 53.44
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.42 53.3
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.42 53.3
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 53.82 53.19
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 54.27 53.16
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.27 53.16
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 55.62 53.0
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 56.07 52.97
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 53.22 52.59
CDY18451 Canola cytosol, peroxisome, plasma membrane 58.47 52.56
CDX93388 Canola plasma membrane 58.32 52.5
EES18923 Sorghum cytosol, peroxisome, plasma membrane 56.07 52.38
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 55.47 51.97
EES17614 Sorghum cytosol, peroxisome, vacuole 54.87 51.55
Zm00001d035553_P001 Maize plasma membrane 55.02 51.4
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 60.87 51.39
CDX73549 Canola cytosol, peroxisome, plasma membrane 58.17 51.32
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 56.67 50.87
EER95064 Sorghum cytosol, peroxisome, plasma membrane 60.42 50.63
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 56.07 50.2
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 56.82 50.07
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 56.82 50.07
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 59.52 49.87
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 59.22 49.87
TraesCS3B01G387500.1 Wheat plastid 56.52 49.8
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 56.37 49.74
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 56.37 49.74
Os01t0836600-01 Rice plasma membrane 55.62 49.53
Zm00001d042953_P001 Maize plasma membrane 56.22 49.28
Os03t0281900-01 Rice cytosol, plasma membrane 58.02 49.17
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 59.22 46.97
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 55.02 46.51
CDY50899 Canola cytosol 21.74 43.54
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 55.02 40.82
HORVU5Hr1G021110.1 Barley cytosol 25.19 39.16
HORVU4Hr1G058070.2 Barley cytosol 46.33 37.91
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 36.28 36.89
CDY02516 Canola cytosol, peroxisome, plasma membrane 30.28 34.35
CDY59400 Canola cytosol, plasma membrane, plastid 29.84 33.84
CDX89610 Canola cytosol, peroxisome, plasma membrane 30.13 33.22
CDX93119 Canola cytosol, peroxisome, plasma membrane 30.13 33.22
CDX76122 Canola plasma membrane 63.12 32.84
CDY13996 Canola plasma membrane 23.54 32.78
CDY02906 Canola plasma membrane 62.97 32.68
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.58 31.85
CDY27043 Canola plastid 28.04 31.75
CDX94418 Canola plastid 26.99 31.41
CDY36670 Canola cytosol 17.09 31.41
CDX96159 Canola plastid 27.59 31.24
CDX89396 Canola plasma membrane 26.84 31.24
CDX96366 Canola cytosol 17.09 30.89
CDX92533 Canola plastid 28.94 30.68
GSMUA_Achr6P08820_001 Banana plasma membrane 52.32 28.24
CDY29837 Canola plasma membrane 26.09 27.02
CDX92829 Canola plasma membrane 25.94 26.86
CDX68292 Canola cytosol, peroxisome, plasma membrane 25.64 26.31
CDY49155 Canola cytosol, peroxisome, plasma membrane 25.34 26.04
CDY29304 Canola cytosol, peroxisome, plasma membrane 24.89 26.02
CDX89252 Canola cytosol, peroxisome, plasma membrane 24.74 25.86
CDY50951 Canola cytosol, peroxisome, plastid 24.74 25.74
CDY47690 Canola cytosol, peroxisome, plastid 24.74 25.74
CDY46506 Canola cytosol, peroxisome, plasma membrane 25.49 25.45
CDY48079 Canola plastid 25.34 25.41
CDY51602 Canola plastid 25.34 25.38
CDX72849 Canola cytosol, peroxisome, plasma membrane 25.64 25.07
CDY03668 Canola plasma membrane 25.64 24.93
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 25.34 24.71
CDX99764 Canola cytosol, peroxisome, plasma membrane 25.34 24.67
CDY24203 Canola peroxisome 25.19 24.67
CDY43362 Canola cytosol, peroxisome, plasma membrane 25.19 24.67
CDX70095 Canola plastid 26.24 24.27
CDY04991 Canola plastid 25.79 23.96
CDY23205 Canola plastid 26.09 23.67
CDY12299 Canola cytosol, peroxisome, plasma membrane 25.19 23.6
CDX95330 Canola plastid 26.09 23.58
CDX98933 Canola plasma membrane 26.24 23.18
CDY14079 Canola plasma membrane 25.94 23.01
CDY12359 Canola cytosol, nucleus, plasma membrane 10.19 22.59
CDY37372 Canola cytosol, peroxisome, plasma membrane 24.74 22.51
CDY40385 Canola cytosol, peroxisome, plasma membrane 24.74 22.39
CDX96365 Canola plasma membrane 10.34 17.88
CDY36671 Canola plasma membrane 9.15 17.63
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078CJA5InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX76119ProteinID:CDX76119ProteinID:CDX76119.1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00126395001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE531DSEG:seg::
Description
BnaA04g03830D
Coordinates
chrLK031806:+:971583..973943
Molecular Weight (calculated)
74371.4 Da
IEP (calculated)
7.412
GRAVY (calculated)
0.130
Length
667 amino acids
Sequence
(BLAST)
001: MMNLPMSARK ITMPCVMEEP PYILPDGSPT LVELLKDCDT FNNLEYSVTL RQRFGFSSTS VKTLLDDVSG EACDGDILAV LGASGAGKST LIDALAGRVA
101: KESLRGSVTL NGDNVLQSSL LKVISAYVMQ DDLLFPMLTV KETLMFASEF RLPRSLSKSK KMERVEALID QLGLRNAADT RIGDEGHRGV SGGERRRVSI
201: GMDIIHDPIV LFLDEPTSGL DSTNAFMVVQ VLKRIAQSGS IVIMSIHQPS ARILDLLDRL IILSQGKSVF NGSPASLPSF FSDFGHPIPE RENITEFALD
301: LVRELEREST EGTRELVEFN EKWQKTIFAR DTTQTGSDQS LSLKKAIDAS VSRGKLVSGS SGSNLLSMET VSSYANPSLF ETFILAKRYM KNWIRMPELV
401: GTRIATVMVT GFLLATVYWK LDNTPRGAQE RLTFFAFVVP TMFYCCLDNV PVFIQERYIF LRETTHNAYR TSSYVISHSL VTMPQLIAPS IVFASITFWA
501: VGLNGGLQGF FFYVLIIYAS FWSGSSVVTF ISGVLPNIML SYMVAISYLA YCLLLSGFYV NRDRIPIYWM WFHYISLLKF PYEAVLINEF DDPSRCFVKG
601: VQVFDGTLIG GVSDSGKVKL LQTLGMSLRK RITESTCLRT GSDLLAQQSI TQLSKWDCLW ITKNKRT
Best Arabidopsis Sequence Match ( AT3G55130.1 )
(BLAST)
001: MNLSLSGRKI AMTRVSAETQ YITPIGSPTL DELLKDCDSF RKGDSGDGVK SDDPAHHIID VEALYVKPVP YVLNFNNLQY DVTLRRRFGF SRQNGVKTLL
101: DDVSGEASDG DILAVLGASG AGKSTLIDAL AGRVAEGSLR GSVTLNGEKV LQSRLLKVIS AYVMQDDLLF PMLTVKETLM FASEFRLPRS LSKSKKMERV
201: EALIDQLGLR NAANTVIGDE GHRGVSGGER RRVSIGIDII HDPIVLFLDE PTSGLDSTNA FMVVQVLKRI AQSGSIVIMS IHQPSARIVE LLDRLIILSR
301: GKSVFNGSPA SLPGFFSDFG RPIPEKENIS EFALDLVREL EGSNEGTKAL VDFNEKWQQN KISLIQSAPQ TNKLDQDRSL SLKEAINASV SRGKLVSGSS
401: RSNPTSMETV SSYANPSLFE TFILAKRYMK NWIRMPELVG TRIATVMVTG CLLATVYWKL DHTPRGAQER LTLFAFVVPT MFYCCLDNVP VFIQERYIFL
501: RETTHNAYRT SSYVISHSLV SLPQLLAPSL VFSAITFWTV GLSGGLEGFV FYCLLIYASF WSGSSVVTFI SGVVPNIMLC YMVSITYLAY CLLLSGFYVN
601: RDRIPFYWTW FHYISILKYP YEAVLINEFD DPSRCFVRGV QVFDSTLLGG VSDSGKVKLL ETLSKSLRTK ITESTCLRTG SDLLAQQGIT QLSKWDCLWI
701: TFASGLFFRI LFYFALLFGS RNKRT
Arabidopsis Description
ABCG19ABC transporter G family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3D6]
SUBAcon: [mitochondrion,peroxisome,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.