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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 98.63 98.9
CDY09810 Canola plastid 98.35 95.21
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 91.21 91.33
CDY44641 Canola plasma membrane 33.79 82.83
CDX74853 Canola plastid 67.17 79.25
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 74.86 75.28
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 76.24 74.3
Solyc05g054890.2.1 Tomato cytosol 75.55 73.33
KRG92984 Soybean cytosol, peroxisome, plasma membrane 75.14 72.93
PGSC0003DMT400029838 Potato extracellular 68.13 71.37
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 70.33 71.31
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 70.88 71.27
Solyc04g010210.1.1 Tomato extracellular 68.68 70.03
CDX93388 Canola plasma membrane 68.54 67.34
CDY18451 Canola cytosol, peroxisome, plasma membrane 68.27 66.98
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 63.46 65.44
CDX73549 Canola cytosol, peroxisome, plasma membrane 67.86 65.34
GSMUA_Achr5P28450_001 Banana plasma membrane 62.36 65.04
CDY02907 Canola cytosol, peroxisome, plasma membrane 56.46 64.72
CDY40201 Canola cytosol 62.36 64.12
CDX67624 Canola cytosol, peroxisome, plasma membrane 61.81 63.65
CDX76119 Canola cytosol, peroxisome, plasma membrane 58.24 63.57
CDX76121 Canola cytosol 40.52 62.63
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 67.86 62.53
Os05t0120200-01 Rice plasma membrane 60.03 62.52
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 58.24 62.26
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.97 61.97
EER95064 Sorghum cytosol, peroxisome, plasma membrane 67.72 61.93
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 63.05 61.78
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.69 61.67
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.55 61.53
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 62.91 61.48
Os05t0120000-00 Rice plasma membrane 57.42 61.47
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 66.76 61.36
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 66.9 61.18
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 58.24 61.1
CDY65003 Canola cytosol, peroxisome, plasma membrane 59.89 61.06
Zm00001d035553_P001 Maize plasma membrane 59.89 61.06
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 63.32 60.9
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 63.32 60.9
CDY37656 Canola cytosol, peroxisome, plasma membrane 59.62 60.87
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 57.69 60.69
TraesCS3B01G387500.1 Wheat plastid 63.05 60.63
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 62.91 60.58
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 62.91 60.58
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 58.1 60.43
EES17614 Sorghum cytosol, peroxisome, vacuole 58.79 60.28
EES18923 Sorghum cytosol, peroxisome, plasma membrane 59.07 60.22
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 55.22 60.18
Os03t0281900-01 Rice cytosol, plasma membrane 64.97 60.1
Os01t0836600-01 Rice plasma membrane 61.81 60.08
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 58.65 59.97
Zm00001d042953_P001 Maize plasma membrane 62.5 59.79
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 54.26 58.52
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 53.98 58.22
CDX73404 Canola plasma membrane 63.05 58.17
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 66.62 57.67
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 57.97 53.49
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 63.19 51.17
CDY50899 Canola cytosol 23.21 50.75
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 42.17 46.8
HORVU4Hr1G058070.2 Barley cytosol 51.1 45.64
HORVU5Hr1G021110.1 Barley cytosol 25.27 42.89
CDX76122 Canola plasma membrane 72.53 41.19
CDY02906 Canola plasma membrane 72.25 40.93
CDX89610 Canola cytosol, peroxisome, plasma membrane 30.63 36.86
CDX93119 Canola cytosol, peroxisome, plasma membrane 30.63 36.86
CDY02516 Canola cytosol, peroxisome, plasma membrane 29.26 36.22
Os03t0282100-00 Rice cytosol, nucleus, plastid 37.77 35.9
CDY13996 Canola plasma membrane 23.49 35.7
CDY59400 Canola cytosol, plasma membrane, plastid 28.71 35.54
CDY27043 Canola plastid 27.34 33.79
GSMUA_Achr6P08820_001 Banana plasma membrane 57.14 33.66
CDX94418 Canola plastid 26.37 33.51
CDX89396 Canola plasma membrane 26.24 33.33
CDX96159 Canola plastid 26.79 33.11
CDY36670 Canola cytosol 16.48 33.06
CDX96366 Canola cytosol 16.62 32.79
CDX92533 Canola plastid 28.16 32.59
CDY29837 Canola plasma membrane 26.1 29.5
CDX68292 Canola cytosol, peroxisome, plasma membrane 26.24 29.38
CDX92829 Canola plasma membrane 25.96 29.35
CDX72849 Canola cytosol, peroxisome, plasma membrane 27.2 29.03
CDY48079 Canola plastid 26.51 29.02
CDY29304 Canola cytosol, peroxisome, plasma membrane 25.41 29.0
CDX89252 Canola cytosol, peroxisome, plasma membrane 25.27 28.84
CDY51602 Canola plastid 26.37 28.83
CDY46506 Canola cytosol, peroxisome, plasma membrane 25.96 28.29
CDY49155 Canola cytosol, peroxisome, plasma membrane 25.14 28.2
CDY47690 Canola cytosol, peroxisome, plastid 24.73 28.08
CDY50951 Canola cytosol, peroxisome, plastid 24.73 28.08
CDY03668 Canola plasma membrane 26.37 27.99
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 26.24 27.92
CDX99764 Canola cytosol, peroxisome, plasma membrane 25.96 27.59
CDX70095 Canola plastid 26.51 26.77
CDY04991 Canola plastid 26.24 26.6
CDX95330 Canola plastid 26.79 26.42
CDY23205 Canola plastid 26.65 26.39
CDY24203 Canola peroxisome 24.04 25.7
CDX98933 Canola plasma membrane 26.51 25.56
CDY12299 Canola cytosol, peroxisome, plasma membrane 25.0 25.56
CDY43362 Canola cytosol, peroxisome, plasma membrane 23.9 25.55
CDY14079 Canola plasma membrane 26.24 25.4
CDY12359 Canola cytosol, nucleus, plasma membrane 10.16 24.58
CDY36671 Canola plasma membrane 10.71 22.54
CDX96365 Canola plasma membrane 11.95 22.54
CDY37372 Canola cytosol, peroxisome, plasma membrane 22.66 22.51
CDY40385 Canola cytosol, peroxisome, plasma membrane 22.66 22.39
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078C0F7InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX69629ProteinID:CDX69629ProteinID:CDX69629.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00135647001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF428SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EEFF35SEG:seg:::
Description
BnaA10g19780D
Coordinates
chrLK031790:-:1091032..1093845
Molecular Weight (calculated)
80423.8 Da
IEP (calculated)
10.059
GRAVY (calculated)
0.161
Length
728 amino acids
Sequence
(BLAST)
001: MSRVVAADDN MSLPFFSPEP NHLSTFSTAS SSPTFAQLLK NVGDTTTDQH HVDMNLTSPN QSVPFHLSFN DLTYSVKVRR KFTWKRAPSA DPIVGESPLS
101: SKTKTLLNGI SGEARDGEIL AVLGASGSGK STLIDALANR IAKGSLKGNV TLNGEVLNSK MQKAISAYVM QDDLLFPMLT VEETLMFAAE FRLPRSLSKS
201: KKSLRVQALI DQLGLRNAAK TIIGDEGHRG ISGGERRRVS IGIDIIHDPI LLFLDEPTSG LDSTSALSVV KVLKRIAQSG SMVIMTLHQP SYRLLRLLDR
301: LLFLSRGQTV FSGSPAMLPS FFAEFGHPIP ERENRTEFAL DLIRELEGSA GGTRSLVEFN KEFRQRKAEP RTQTGLSLKE AISASISKGK LVSGATSGGS
401: GSSPVSTIPT FANPFWVELL VLAKRSMTNY RRQPELFGIR LGAVLVTGFI LATMFWQLDN SPKGVQERLG FFAFAMSTTF YTCADALPVF LQERFIFMRE
501: TAYNAYRRSS YVLSHSLVAL PSLIILSLAF AATTFWAVGL DGGLMGFLFY FLIVLAAFWA GSSFVTFLSG VVPHVMLGYT IVVAILAYFL LFSGFFITRD
601: RIPAYWIWFH YISLVKYPYE AVLINEFSDP TKCFIRGVQI FDNTPLAAVP QGMKVKLLST MSKSLGMRIT SSTCLTTGYD ILQQQGVTDL SKWNCLWITV
701: AWGFFFRILF YFSLLLGSKN KRRQGGCS
Best Arabidopsis Sequence Match ( AT5G13580.1 )
(BLAST)
001: MSRVVAADDN MALPFFSPEF GNVSGASSSP TTFAQLLQNV DDSTRRSHHQ HHVDVDLASP DQSVPFVLSF TDLTYSVKVR RKFTWRRSVS SDPGAPSEGI
101: FSSKTKTLLN GITGEARDGE ILAVLGASGS GKSTLIDALA NRIAKGSLKG NVTLNGEVLN SKMQKAISAY VMQDDLLFPM LTVEETLMFA AEFRLPRSLS
201: KSKKSLRVQA LIDQLGLRNA ANTVIGDEGH RGISGGERRR VSIGIDIIHD PILLFLDEPT SGLDSTSALS VIKVLKRIAQ SGSMVIMTLH QPSYRLLRLL
301: DRLLFLSRGQ TVFSGSPAML PRFFAEFGHP IPEHENRTEF ALDLIRELEG SAGGTRSLVE FNKGFRQRKA EPRSQTGLSL KEAISASISK GKLVSGATTT
401: THSSGSSPVS TIPTFANPFW VELAVLAKRS MTNSRRQPEL FGIRLGAVLV TGFILATMFW QLDNSPKGVQ ERLGCFAFAM STTFYTCADA LPVFLQERFI
501: FMRETAYNAY RRSSYVLSHS LVALPSLIIL SLAFAAITFW GVGLDGGLMG FLFYFLVILA SFWAGSSFVT FLSGVVPHVM LGYTIVVAIL AYFLLFSGFF
601: INRDRIPGYW IWFHYISLVK YPYEAVLLNE FGDPTKCFVR GVQIFDNTPL VAVPQGMKVR LLATMSKSLG MRITSSTCLT TGYDILQQQG VTDLTKWNCL
701: WVTVAWGFFF RILFYFSLLL GSKNKRR
Arabidopsis Description
ABCG6ABC transporter G family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.