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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane, plastid
Any Predictor:cytosol, peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007999.1-P Field mustard plasma membrane 93.27 96.81
CDY03668 Canola plasma membrane 94.01 93.73
CDX68292 Canola cytosol, peroxisome, plasma membrane 83.48 87.85
CDY36671 Canola plasma membrane 43.42 85.84
CDX72849 Canola cytosol, peroxisome, plasma membrane 85.23 85.48
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 82.46 85.2
CDX96366 Canola cytosol 44.01 81.57
CDY36670 Canola cytosol 43.27 81.54
CDX96365 Canola plasma membrane 45.32 80.31
PGSC0003DMT400002293 Potato cytosol, peroxisome, plasma membrane 57.6 65.34
Solyc11g018680.1.1 Tomato golgi, mitochondrion, plasma membrane, plastid 27.05 63.79
KRG91794 Soybean cytosol, peroxisome, plasma membrane, plastid 60.82 62.09
KRH34992 Soybean cytosol, plasma membrane, plastid 59.94 61.29
VIT_18s0072g01220.t01 Wine grape cytosol, peroxisome, plasma membrane 59.21 60.99
Solyc11g018690.1.1 Tomato cytosol 30.12 60.23
Os11t0177400-01 Rice plasma membrane 40.5 58.56
GSMUA_Achr6P25480_001 Banana cytosol, peroxisome, plastid 55.12 58.45
GSMUA_Achr11P... Banana plasma membrane 51.17 57.76
Zm00001d053049_P001 Maize plasma membrane 50.88 54.72
Zm00001d004762_P001 Maize plasma membrane 50.44 54.59
TraesCS4D01G092000.1 Wheat plasma membrane 50.44 53.24
KXG27901 Sorghum plasma membrane, plastid 50.44 53.16
TraesCS4A01G216900.1 Wheat plasma membrane, plastid 50.15 53.01
TraesCS4B01G095200.1 Wheat plastid 49.71 52.8
HORVU4Hr1G018800.7 Barley plastid 49.27 52.49
GSMUA_Achr9P08630_001 Banana cytosol, peroxisome, plasma membrane 50.73 51.18
CDX92829 Canola plasma membrane 45.76 48.6
CDX89252 Canola cytosol, peroxisome, plasma membrane 45.18 48.43
CDY29304 Canola cytosol, peroxisome, plasma membrane 45.18 48.43
CDY29837 Canola plasma membrane 45.32 48.14
CDY50951 Canola cytosol, peroxisome, plastid 44.74 47.74
CDY47690 Canola cytosol, peroxisome, plastid 44.59 47.58
CDY46506 Canola cytosol, peroxisome, plasma membrane 45.76 46.86
CDY49155 Canola cytosol, peroxisome, plasma membrane 44.15 46.53
CDY48079 Canola plastid 45.03 46.32
CDY51602 Canola plastid 44.74 45.95
CDX99764 Canola cytosol, peroxisome, plasma membrane 45.32 45.26
CDY12299 Canola cytosol, peroxisome, plasma membrane 44.01 42.28
CDY12359 Canola cytosol, nucleus, plasma membrane 17.54 39.87
CDX70095 Canola plastid 40.35 38.28
CDY04991 Canola plastid 39.91 38.02
CDY23205 Canola plastid 40.35 37.55
CDX98933 Canola plasma membrane 40.5 36.69
CDX95330 Canola plastid 39.47 36.59
CDY14079 Canola plasma membrane 40.06 36.44
CDY24203 Canola peroxisome 35.53 35.68
CDY43362 Canola cytosol, peroxisome, plasma membrane 35.53 35.68
CDX76121 Canola cytosol 21.64 31.42
CDX89610 Canola cytosol, peroxisome, plasma membrane 25.29 28.59
CDX93119 Canola cytosol, peroxisome, plasma membrane 25.15 28.43
CDY02907 Canola cytosol, peroxisome, plasma membrane 26.32 28.35
CDX74853 Canola plastid 25.29 28.04
CDX92533 Canola plastid 24.85 27.03
CDX96159 Canola plastid 23.25 26.99
CDY27043 Canola plastid 23.1 26.83
CDY13996 Canola plasma membrane 18.57 26.51
CDY02516 Canola cytosol, peroxisome, plasma membrane 22.66 26.36
CDX69629 Canola plastid 27.92 26.24
CDY59400 Canola cytosol, plasma membrane, plastid 22.51 26.19
CDX94418 Canola plastid 21.93 26.18
CDX67624 Canola cytosol, peroxisome, plasma membrane 26.9 26.03
CDX89396 Canola plasma membrane 21.78 26.0
CDY50899 Canola cytosol 12.43 25.53
CDY09810 Canola plastid 27.92 25.4
CDX76119 Canola cytosol, peroxisome, plasma membrane 24.71 25.34
CDY40201 Canola cytosol 26.17 25.28
CDY37656 Canola cytosol, peroxisome, plasma membrane 26.17 25.11
CDY65003 Canola cytosol, peroxisome, plasma membrane 26.02 24.93
CDX93388 Canola plasma membrane 26.9 24.83
CDY18451 Canola cytosol, peroxisome, plasma membrane 26.75 24.66
CDY37372 Canola cytosol, peroxisome, plasma membrane 26.32 24.56
CDY40385 Canola cytosol, peroxisome, plasma membrane 26.32 24.42
CDX73549 Canola cytosol, peroxisome, plasma membrane 26.9 24.34
CDX73404 Canola plasma membrane 26.61 23.07
CDY44641 Canola plasma membrane 9.65 22.22
CDY02906 Canola plasma membrane 27.78 14.79
CDX76122 Canola plasma membrane 27.63 14.74
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078D1S7InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
EnsemblPlants:CDX82199ProteinID:CDX82199ProteinID:CDX82199.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787GO:GO:0016887
EnsemblPlantsGene:GSBRNA2T00137285001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF225SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE6D4F
SEG:seg:::::
Description
BnaC02g20910D
Coordinates
chrLK031827:+:1920088..1927108
Molecular Weight (calculated)
75527.6 Da
IEP (calculated)
8.824
GRAVY (calculated)
0.182
Length
684 amino acids
Sequence
(BLAST)
001: MSSFDGVENQ RNGLDLSARL PQDPREPRSI LSSSSPCFPI TLRFVDVCYR VKIHGKTGES GKIQRLLGLD HKPSDETTST EERTILNGVT GMVSPGEFMA
101: VLGPSGSGKS TLLNAIAGRL HGPGLTGKIL MNDVKPTKQT LKRTGFVAQD DLLYPHLTVR ETLVFVALLR LPRSLTRHDK IKAAESVISE LGLEKCENTV
201: VGNTFIRGIS GGERKRVSIA HELLINPSLL VLDEPTSGLD ATAALRLVQT LAGMAHGRGK AVVTSIHQPS SRVFQMFDTV LLLCEGKCLF YGKGRDAMAY
301: FESVGFSPAF PMNPADFLLD LANGTLIQYG VKTCLNIGEL VGPNNTIGVC QIDGMTEREK PNVKQTLAVA YNTLLAPNVK TCIDAAPSLG ENMRFVKTRE
401: NEHGITSGIT TWSSQLCILL HRLLKERRHE SFDALRVFQV IASSLLSGLM WWHSDYRDVH DRLGLLFFIS IFWGVIPSFN AVFTFPQERA IFTRERSSGM
501: YTLSSYFMAH VIGSLSMELV LPAVFLTLTY WMVGLRPGLV PFLLTLFVLL LYVLASQGLG LALGAAIMDA KKASTIVTVT MLAFVLTGGY YVNKVPYGMV
601: WMKYISTTFY CYRLLIAIQY GNGDEILRMF GCEPKRTQGT AMTAGCRFME EEVVGDIGMW TSVSVLFFMF ASYRVLAYLA LRRI
Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)
001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
Arabidopsis Description
ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.