Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G216900.1 | Wheat | plasma membrane, plastid | 97.22 | 97.37 |
| TraesCS4B01G095200.1 | Wheat | plastid | 96.6 | 97.2 |
| HORVU4Hr1G018800.7 | Barley | plastid | 93.36 | 94.24 |
| Os11t0177400-01 | Rice | plasma membrane | 61.11 | 83.72 |
| Zm00001d053049_P001 | Maize | plasma membrane | 79.94 | 81.45 |
| Zm00001d004762_P001 | Maize | plasma membrane | 78.86 | 80.85 |
| KXG27901 | Sorghum | plasma membrane, plastid | 80.86 | 80.74 |
| GSMUA_Achr6P25480_001 | Banana | cytosol, peroxisome, plastid | 60.34 | 60.62 |
| GSMUA_Achr11P... | Banana | plasma membrane | 55.71 | 59.57 |
| PGSC0003DMT400002293 | Potato | cytosol, peroxisome, plasma membrane | 52.93 | 56.88 |
| Solyc11g018680.1.1 | Tomato | golgi, mitochondrion, plasma membrane, plastid | 24.85 | 55.52 |
| KRG91794 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 56.17 | 54.33 |
| KRH34992 | Soybean | cytosol, plasma membrane, plastid | 56.02 | 54.26 |
| VIT_18s0072g01220.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 55.4 | 54.07 |
| GSMUA_Achr9P08630_001 | Banana | cytosol, peroxisome, plasma membrane | 56.02 | 53.54 |
| CDX68292 | Canola | cytosol, peroxisome, plasma membrane | 52.31 | 52.15 |
| Bra003903.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 52.01 | 51.85 |
| Bra007999.1-P | Field mustard | plasma membrane | 52.62 | 51.75 |
| Bra016095.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 52.78 | 51.74 |
| Solyc11g018690.1.1 | Tomato | cytosol | 27.16 | 51.46 |
| CDY36670 | Canola | cytosol | 28.7 | 51.24 |
| AT1G71960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.16 | 51.06 |
| CDX82199 | Canola | cytosol, peroxisome, plasma membrane, plastid | 53.24 | 50.44 |
| CDX96366 | Canola | cytosol | 28.7 | 50.41 |
| CDX72849 | Canola | cytosol, peroxisome, plasma membrane | 52.78 | 50.15 |
| CDY03668 | Canola | plasma membrane | 52.62 | 49.71 |
| CDY36671 | Canola | plasma membrane | 26.39 | 49.42 |
| CDX96365 | Canola | plasma membrane | 27.93 | 46.89 |
| TraesCS7D01G067300.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 46.3 | 43.67 |
| TraesCS7D01G375300.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.65 | 36.8 |
| TraesCS4D01G271500.1 | Wheat | plastid | 42.13 | 36.3 |
| TraesCS3D01G231500.1 | Wheat | mitochondrion, plastid | 26.7 | 28.59 |
| TraesCS3D01G019000.1 | Wheat | golgi | 28.55 | 27.78 |
| TraesCS5D01G093600.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 29.17 | 27.75 |
| TraesCS1D01G052000.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.86 | 27.02 |
| TraesCS1D01G240600.1 | Wheat | plasma membrane | 26.7 | 26.49 |
| TraesCS2D01G585300.1 | Wheat | plasma membrane | 27.47 | 26.41 |
| TraesCS7D01G337600.1 | Wheat | cytosol, peroxisome, plasma membrane | 26.23 | 25.68 |
| TraesCS3D01G348400.1 | Wheat | plasma membrane, plastid | 28.24 | 24.21 |
| TraesCS3D01G254600.1 | Wheat | cytosol, peroxisome, plasma membrane | 25.77 | 23.16 |
| TraesCS4D01G201700.1 | Wheat | mitochondrion, plasma membrane, plastid | 28.24 | 21.76 |
| TraesCS5D01G211000.1 | Wheat | cytosol | 25.93 | 19.09 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009737 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0080168 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF225 |
| SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G092000 | EnsemblPlants:TraesCS4D01G092000.1 | SEG:seg |
Description
No Description!
Coordinates
chr4D:-:67114234..67118344
Molecular Weight (calculated)
68471.2 Da
IEP (calculated)
9.122
GRAVY (calculated)
0.306
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPNGQSVHG GGGGGGLVSP TAAPAPSSKM DCFLTSVCTP LNLQFIDVAY RVKVERTAGP AKEPPGRISH SGGGGGGLGG VSAAVEERTI LKGITGEARP
101: GEVLAVLGPS GSGKSTLLSI LGGRLAGRYS GTVLTGGRAP CRAVQRRTGF VAQDDILHPH LTVRETLAFC AMLRLPTSAP TSAKLAAADA VIAELGLGAC
201: ADTIVGNAFV RGVSGGERKR VSIGHELLVN PSLLVLDEPT SGLDSTAASR LVATLSALAR RGRTVVLSVH QPSSRVYRAF DSVLLLSEGS CMYHGPGRDA
301: MDYFASVGFA PGFHVNPADF MLDLANGFAQ AEYSDRAAEG VSVKQSLIAS YARELAPKVK AAIGAGAHVE NGHAGGGAGE QPLESCSGSG CTSWTNQFTI
401: LLRRSLKERR HETFTSLRLF QIIAPALVAG AMWWRSTPLE VQDRMGLLFF ISIFWGVFAS FNAVFAFPQE RPVLARERAS GMYSLSSYFM ARMAGDLPME
501: LALPAAFTVI VYLMAGLNPA PAAFALTLVV ILSYVLVAEG LGLAIGALMM DAKRASTLAT VIMLAYLLTG GFYVHNVPIF MIWAKYSSFT YYCYRLLIAV
601: QYSGHLAQLL PLESTHGEAG TWTCVAALVA MFFGYRLLAY FALRRVRT
101: GEVLAVLGPS GSGKSTLLSI LGGRLAGRYS GTVLTGGRAP CRAVQRRTGF VAQDDILHPH LTVRETLAFC AMLRLPTSAP TSAKLAAADA VIAELGLGAC
201: ADTIVGNAFV RGVSGGERKR VSIGHELLVN PSLLVLDEPT SGLDSTAASR LVATLSALAR RGRTVVLSVH QPSSRVYRAF DSVLLLSEGS CMYHGPGRDA
301: MDYFASVGFA PGFHVNPADF MLDLANGFAQ AEYSDRAAEG VSVKQSLIAS YARELAPKVK AAIGAGAHVE NGHAGGGAGE QPLESCSGSG CTSWTNQFTI
401: LLRRSLKERR HETFTSLRLF QIIAPALVAG AMWWRSTPLE VQDRMGLLFF ISIFWGVFAS FNAVFAFPQE RPVLARERAS GMYSLSSYFM ARMAGDLPME
501: LALPAAFTVI VYLMAGLNPA PAAFALTLVV ILSYVLVAEG LGLAIGALMM DAKRASTLAT VIMLAYLLTG GFYVHNVPIF MIWAKYSSFT YYCYRLLIAV
601: QYSGHLAQLL PLESTHGEAG TWTCVAALVA MFFGYRLLAY FALRRVRT
001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
Arabidopsis Description
ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.