Factsheet for TraesCS4A01G216900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G092000.1	Wheat	plasma membrane	97.37	97.22
TraesCS4B01G095200.1	Wheat	plastid	95.36	95.81
HORVU4Hr1G018800.7	Barley	plastid	92.58	93.3
Os11t0177400-01	Rice	plasma membrane	60.9	83.3
Zm00001d053049_P001	Maize	plasma membrane	78.98	80.35
Zm00001d004762_P001	Maize	plasma membrane	78.05	79.91
KXG27901	Sorghum	plasma membrane, plastid	79.75	79.51
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	59.97	60.16
GSMUA_Achr11P...	Banana	plasma membrane	55.95	59.74
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	52.7	56.55
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	24.88	55.52
KRH34992	Soybean	cytosol, plasma membrane, plastid	56.57	54.71
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	56.57	54.63
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.18	53.77
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	55.95	53.39
CDX68292	Canola	cytosol, peroxisome, plasma membrane	51.78	51.54
Solyc11g018690.1.1	Tomato	cytosol	27.2	51.46
Bra007999.1-P	Field mustard	plasma membrane	52.4	51.44
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.4	51.29
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.47	51.23
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	52.24	51.06
CDY36670	Canola	cytosol	28.59	50.96
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	53.01	50.15
CDX96366	Canola	cytosol	28.59	50.14
CDX72849	Canola	cytosol, peroxisome, plasma membrane	52.4	49.71
CDY03668	Canola	plasma membrane	52.4	49.42
CDY36671	Canola	plasma membrane	26.12	48.84
CDX96365	Canola	plasma membrane	27.67	46.37
TraesCS4A01G370500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	46.99	44.64
TraesCS7A01G071700.1	Wheat	plastid	46.83	44.49
TraesCS4A01G032900.1	Wheat	plastid	42.5	36.09
TraesCS7A01G378500.2	Wheat	cytosol, peroxisome, plasma membrane	37.87	35.46
TraesCS3A01G221400.1	Wheat	plastid	26.74	28.59
TraesCS3A01G026500.1	Wheat	extracellular, plasma membrane, vacuole	28.75	27.93
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	29.06	27.85
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	28.9	27.46
TraesCS2A01G574700.1	Wheat	plasma membrane	27.36	27.23
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	29.06	26.86
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	26.74	26.45
TraesCS7A01G342000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	26.12	25.53
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	28.44	24.34
TraesCS3A01G253700.1	Wheat	cytosol, peroxisome, plasma membrane	25.81	23.16
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	27.98	22.74
TraesCS5A01G205100.1	Wheat	mitochondrion	25.66	18.38

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009719	GO:GO:0009737
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0080168	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF225
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G216900	EnsemblPlants:TraesCS4A01G216900.1	SEG:seg

Description

No Description!

Coordinates

chr4A:-:515779130..515782750

Molecular Weight (calculated)

68531.3 Da

IEP (calculated)

8.804

GRAVY (calculated)

0.309

Length

647 amino acids

Sequence
(BLAST)

001: MPPNGQTVHG GGGGGLVSPT AATPVPSSKM DCFLSSVCTP LNLQFIDVAY RVKVERTAGP AKEPPGRISH SGGGAGGLGG VSAAVEERTI LKGITGEARP
101: GEVLAVLGPS GSGKSTLLSI LGGRLAGRYS GTVLTGGRAP CRAVQRCTGF VAQDDILHPH LTVRETLAFC AMLRLPATAP TSAKLAAADA VIAELGLGAC
201: ADTIVGNAFV RGVSGGERKR VSIGHELLVN PSLLVLDEPT SGLDSTAASR LVATLSALAR RGRTVVLSVH QPSSRVYRAF DSVLLLSEGS CMYHGPGRDA
301: MDYFASVGFA PGFHVNPADF MLDLANGFAQ AEYSDRPAEG GSVKQSLIAS YARELAPKVK AAITAGAHVD ENGHAGAGEQ PLESCSGSGC TSWTNQFTIL
401: LRRSLKERRH ETFTSLRLFQ IIAPALVAGA MWWRSTPLEV QDRMGLLFFI SIFWGVFASF NAVFAFPQER PVLARERASG MYSLSSYFMA RMAGDLPMEL
501: ALPAAFTLIV YLMAGLNPAP AAFALTLLVI LSYVLVAEGL GLAIGALMMD AKRASTLATV IMLAYLLTGG FYVHNVPIFM IWAKYSSFTY YCYRLLIAVQ
601: YSGHLAQLLP LDSTHGEAGT WTCVGALVAM FFAYRLLAYF ALRRVRT

Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)

001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH

Arabidopsis Description

ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.