Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G092000.1 | Wheat | plasma membrane | 97.2 | 96.6 |
| TraesCS4A01G216900.1 | Wheat | plasma membrane, plastid | 95.81 | 95.36 |
| HORVU4Hr1G018800.7 | Barley | plastid | 93.17 | 93.46 |
| Os11t0177400-01 | Rice | plasma membrane | 61.02 | 83.09 |
| Zm00001d053049_P001 | Maize | plasma membrane | 78.88 | 79.87 |
| Zm00001d004762_P001 | Maize | plasma membrane | 77.8 | 79.27 |
| KXG27901 | Sorghum | plasma membrane, plastid | 79.5 | 78.89 |
| GSMUA_Achr6P25480_001 | Banana | cytosol, peroxisome, plastid | 59.94 | 59.84 |
| GSMUA_Achr11P... | Banana | plasma membrane | 55.43 | 58.91 |
| PGSC0003DMT400002293 | Potato | cytosol, peroxisome, plasma membrane | 52.48 | 56.05 |
| Solyc11g018680.1.1 | Tomato | golgi, mitochondrion, plasma membrane, plastid | 25.16 | 55.86 |
| KRH34992 | Soybean | cytosol, plasma membrane, plastid | 55.75 | 53.66 |
| VIT_18s0072g01220.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 55.28 | 53.61 |
| KRG91794 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 55.75 | 53.58 |
| GSMUA_Achr9P08630_001 | Banana | cytosol, peroxisome, plasma membrane | 55.75 | 52.95 |
| CDX68292 | Canola | cytosol, peroxisome, plasma membrane | 52.17 | 51.69 |
| Bra003903.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 51.86 | 51.38 |
| Bra016095.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 52.48 | 51.13 |
| Bra007999.1-P | Field mustard | plasma membrane | 52.17 | 50.99 |
| AT1G71960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 51.86 | 50.45 |
| CDY36670 | Canola | cytosol | 28.42 | 50.41 |
| Solyc11g018690.1.1 | Tomato | cytosol | 26.71 | 50.29 |
| CDX82199 | Canola | cytosol, peroxisome, plasma membrane, plastid | 52.8 | 49.71 |
| CDX72849 | Canola | cytosol, peroxisome, plasma membrane | 52.48 | 49.56 |
| CDY36671 | Canola | plasma membrane | 26.55 | 49.42 |
| CDX96366 | Canola | cytosol | 28.26 | 49.32 |
| CDY03668 | Canola | plasma membrane | 52.17 | 48.98 |
| CDX96365 | Canola | plasma membrane | 28.11 | 46.89 |
| TraesCS4B01G272400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 41.46 | 35.13 |
| TraesCS7B01G280300.2 | Wheat | cytosol, peroxisome, plasma membrane | 36.96 | 34.34 |
| TraesCS3B01G251300.1 | Wheat | plastid | 26.4 | 28.1 |
| TraesCS3B01G017100.1 | Wheat | extracellular, plasma membrane, vacuole | 28.11 | 27.26 |
| TraesCS5B01G087400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 28.57 | 27.02 |
| TraesCS3B01G047600.1 | Wheat | cytosol, peroxisome, vacuole | 28.26 | 26.96 |
| TraesCS1B01G066000.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.26 | 26.22 |
| TraesCS1B01G252600.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 26.4 | 26.03 |
| TraesCS2B01G612200.1 | Wheat | plasma membrane | 26.55 | 25.33 |
| TraesCS7B01G240900.1 | Wheat | cytosol, peroxisome, plasma membrane | 25.31 | 24.62 |
| TraesCS3B01G387500.1 | Wheat | plastid | 28.11 | 23.91 |
| TraesCS3B01G285600.1 | Wheat | cytosol, peroxisome, plasma membrane | 25.62 | 23.11 |
| TraesCS4B01G200600.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.95 | 22.73 |
| TraesCS5B01G203200.1 | Wheat | cytosol | 25.62 | 18.94 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009737 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0080168 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF225 |
| SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G095200 | EnsemblPlants:TraesCS4B01G095200.1 | SEG:seg |
Description
No Description!
Coordinates
chr4B:-:98695730..98699417
Molecular Weight (calculated)
67841.5 Da
IEP (calculated)
9.111
GRAVY (calculated)
0.301
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPNGQSVHG GGGGLVSPTA APAPSSKMDC FLTSVCTPLN LQFIDVAYRV KVERTAGPAK EPPGRISHSG GGGGGLGGVS AAVEERTILK GITGEARPGE
101: VLAVLGPSGS GKSTLLSILX XXXXGRYSGT VLTGGRAPCR AVQRRTGFVA QDDILHPHRS VRETLAFCAM LRLPTSAPTS AKLAAADAVI AELGLGACAD
201: TIVGNAFVRG VSGGERKRVS IGHELLVNPS LLVLDEPTSG LDSTAASRLV ATLSALARKG RTVVLSVHQP SSRVYRAFDS VLLLSEGSCM YYGPGRDAMD
301: YFASVGFAPG FHVNPADFML DLANGFAQAE YSDRAAEGGS VKQSLLASYA RELAPKVRAA IGAGVHVENG HAAAGAGEQP LESCSGCTSW TNQFTILLRR
401: SLKERRHETF TSLRLFQIIA PALVAGAMWW RSTPLDVQDR MGLLFFISIF WGVFASFNAV FAFPQERPVL ARERASGMYS LSSYFMARMA GDLPMELALP
501: AAFTLIVYLM AGLNPAPAAF ALTLLVILSY VLVAEGLGLA IGALMMDAKR ASTLATVIML AYLLTGGFYV HNVPIFMIWA KYSSFTYYCY RLLIAVQYSG
601: HLAQLLPLES THGEAGTWTC VAALVAMFFG YRLLAYFALR RVRT
101: VLAVLGPSGS GKSTLLSILX XXXXGRYSGT VLTGGRAPCR AVQRRTGFVA QDDILHPHRS VRETLAFCAM LRLPTSAPTS AKLAAADAVI AELGLGACAD
201: TIVGNAFVRG VSGGERKRVS IGHELLVNPS LLVLDEPTSG LDSTAASRLV ATLSALARKG RTVVLSVHQP SSRVYRAFDS VLLLSEGSCM YYGPGRDAMD
301: YFASVGFAPG FHVNPADFML DLANGFAQAE YSDRAAEGGS VKQSLLASYA RELAPKVRAA IGAGVHVENG HAAAGAGEQP LESCSGCTSW TNQFTILLRR
401: SLKERRHETF TSLRLFQIIA PALVAGAMWW RSTPLDVQDR MGLLFFISIF WGVFASFNAV FAFPQERPVL ARERASGMYS LSSYFMARMA GDLPMELALP
501: AAFTLIVYLM AGLNPAPAAF ALTLLVILSY VLVAEGLGLA IGALMMDAKR ASTLATVIML AYLLTGGFYV HNVPIFMIWA KYSSFTYYCY RLLIAVQYSG
601: HLAQLLPLES THGEAGTWTC VAALVAMFFG YRLLAYFALR RVRT
001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
Arabidopsis Description
ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.