CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053049_P001	Maize	plasma membrane	89.98	91.82
Zm00001d004762_P001	Maize	plasma membrane	87.37	89.72
Os11t0177400-01	Rice	plasma membrane	63.33	86.89
TraesCS4D01G092000.1	Wheat	plasma membrane	80.74	80.86
TraesCS4A01G216900.1	Wheat	plasma membrane, plastid	79.51	79.75
HORVU4Hr1G018800.7	Barley	plastid	78.89	79.75
TraesCS4B01G095200.1	Wheat	plastid	78.89	79.5
GSMUA_Achr11P...	Banana	plasma membrane	57.63	61.72
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	61.33	61.71
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	53.0	57.05
KRH34992	Soybean	cytosol, plasma membrane, plastid	56.7	55.01
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	56.7	54.93
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	24.5	54.83
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	56.7	54.28
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.01	53.77
Solyc11g018690.1.1	Tomato	cytosol	27.58	52.34
CDX68292	Canola	cytosol, peroxisome, plasma membrane	52.08	52.0
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.93	51.85
Bra007999.1-P	Field mustard	plasma membrane	52.54	51.75
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.54	51.59
CDY36670	Canola	cytosol	28.81	51.52
CDX96366	Canola	cytosol	29.28	51.49
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	52.39	51.36
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	53.16	50.44
CDX72849	Canola	cytosol, peroxisome, plasma membrane	52.54	50.0
CDY03668	Canola	plasma membrane	52.54	49.71
CDY36671	Canola	plasma membrane	26.04	48.84
CDX96365	Canola	plasma membrane	27.12	45.6
EES13415	Sorghum	plastid	46.69	40.45
OQU76682	Sorghum	mitochondrion, plasma membrane	33.59	36.64
EER92832	Sorghum	plasma membrane	42.53	36.17
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	36.83	35.94
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	35.75	34.99
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	35.59	34.84
EES03276	Sorghum	mitochondrion	27.12	28.76
EES01897	Sorghum	cytosol, plasma membrane, plastid	28.97	27.93
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	28.04	27.41
EES17614	Sorghum	cytosol, peroxisome, vacuole	29.43	26.9
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	25.73	26.42
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	27.43	25.5
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	28.04	25.49
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	28.2	24.56
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	27.43	22.36
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	24.35	21.58
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	26.5	19.61

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1B6PQF9	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009719
GO:GO:0009737	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	GO:GO:0080168	InterPro:IPR003439	EnsemblPlants:KXG27901	ProteinID:KXG27901	ProteinID:KXG27901.1
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF225
SMART:SM00382	EnsemblPlantsGene:SORBI_3005G061000	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00081AD5F3	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:6413870..6419473

Molecular Weight (calculated)

68795.3 Da

IEP (calculated)

9.449

GRAVY (calculated)

0.236

Length

649 amino acids

Sequence
(BLAST)

001: MPPNAHQDAH GSNAGGLAVT TTSPPAAASN SKMDCFLTTA CTPLNLQFID VSYRVKQTTD RSSPSSSKAP PPGGRISAHS GSGAPASSAA EERTILKGIT
101: GEARPGEVLA VLGPSGSGKS TLLSILGGRR LAGRHTGTVL AGGRAPCRAV QRRTGFVAQD DVLHPHLTVR ETLTFCAMLR LPRSAPGAAK AAAAEAVIAE
201: LGLSACADTI VGNAFVRGVS GGERKRVSIG HELLVNPSLL VLDEPTSGLD STAAARLVAT LSALARRGRT VVLSVHQPSS RVYRMFDSVL LLADGSCLYF
301: GAGRDAMDYF ASAGFAPGFH VNPADFMLDL ANGFAQADYN VTAEGGNNVK QSLISSYNKV LAPRVKASIV AADHAQSGDG EQVPPPAESC SSTSWCNQFT
401: ILLQRSLKER RHETFTSLRI FQIMAPALVA GAMWWRSTPV AVQDRLGLLF FVSIFWGVFA SFNAVFAFPQ ERPVLARERA SGMYALSSYF MSRMAGDLPM
501: ELALPTAFTV VVYLMAALNP SPAAFALTLA VILGYVLVAE GLGLAVGAVM MDAKRASTLV TVIMLAYLLT GGFYVHNVPE FMVWAKYTSF TYYCYRLLIA
601: VQYGGHLKRL LPPEAVDGEA GPGACVAALV AMFFGYRLLA YLALRRVRK

Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)

001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH

Arabidopsis Description

ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.