CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	90.11	90.63
TraesCS1D01G240600.1	Wheat	plasma membrane	75.36	80.55
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	75.07	80.25
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	74.93	79.97
HORVU1Hr1G056890.2	Barley	cytosol	74.79	79.69
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	69.34	71.7
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	50.43	60.17
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.0	56.78
Bra002234.1-P	Field mustard	cytosol	38.54	56.04
CDY13996	Canola	plasma membrane	38.4	55.95
KRG89682	Soybean	cytosol, nucleus, peroxisome	50.86	54.12
AT5G19410.2	Thale cress	plastid	48.57	53.55
CDX92533	Canola	plastid	48.14	53.42
Solyc03g113690.1.1	Tomato	plastid	50.0	53.04
KRH50602	Soybean	plastid	49.57	52.82
PGSC0003DMT400062852	Potato	plastid	50.0	52.8
EES03276	Sorghum	mitochondrion	38.54	43.95
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	38.11	42.09
EES01897	Sorghum	cytosol, plasma membrane, plastid	36.25	37.59
EES17614	Sorghum	cytosol, peroxisome, vacuole	32.66	32.11
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	31.38	30.67
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	30.23	28.32
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	28.94	27.6
KXG27901	Sorghum	plasma membrane, plastid	25.5	27.43
OQU76682	Sorghum	mitochondrion, plasma membrane	22.35	26.22
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	29.66	26.0
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	24.64	25.86
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	24.36	25.64
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	24.21	25.49
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	22.35	23.49
EES13415	Sorghum	plastid	24.36	22.7
EER92832	Sorghum	plasma membrane	23.64	21.63
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	26.07	20.75

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1B6P807	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
EnsemblPlants:KXG21900	ProteinID:KXG21900	ProteinID:KXG21900.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF158	SMART:SM00382	EnsemblPlantsGene:SORBI_3009G122300
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00081AB983	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:47279051..47281478

Molecular Weight (calculated)

75348.3 Da

IEP (calculated)

9.020

GRAVY (calculated)

0.230

Length

698 amino acids

Sequence
(BLAST)

001: MEDDGISELY LLSRFAPSSS TPHRHLRAAQ IAMDHQDLSS ELDPALLMST STSSSSPPGS ASPSPSSSSF SHPSPPHYTF AVNNLSCPAP RRRAAATNLL
101: PSFLSSASPA ATDGAAGAAG LLKSVSFTAS SSNILAVVGP SGAGKSTLLR ILSGRGTGSE IAKPGTVSLN GHAVASRAQL RRLCGFVTQD DNLLPLLTVR
201: ETILFAARFR LRAADAATAG ERVEALMQEL GLSEVADSYV GGGDGCGLSA ARGVSGGERK RVSIAVDIVH DPPVLLLDEP TSGLDSRSAL DVLQLLHDVV
301: VLSIHQPSYR MLRYISSLLL LSRGAVAHLG TLKTLEDALA RLGHKIPTQL NPLELAMEVT GQLEEDHRSR SRIAAAHGDR HADDEEEVTR LVISGRRRRR
401: LDVPDQGYCS RFTEVAALTV RCWRTMYRTR ELFAARAAQA VVGGLGLGSV YFRLSPDSPD GVALRLGLFA FTLSFLLSST VEALPVLLHE RRVLMREASR
501: RAYRLSSYVV ANALVFAPCL LAVSLLFSAP LYWLAGLRAT PLAAFAFFVL AVWLIVLMAS SLVLFLSAVS PDFVLGNALI CVFLGVFFLF SGYFIPKDSI
601: PRYWAFMYYV SMYRYPLDLL LINEYGGSAR GKCVAWMGRN SDAMTGGVCL RTGADVLRDR GIDEGMKWVN VGVMLGFFLL YRLMCWAVLI RRASKTTL

Best Arabidopsis Sequence Match ( AT5G19410.2 )
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Arabidopsis Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.