Factsheet for GSMUA_Achr2P06780_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.18	62.68
KRG89682	Soybean	cytosol, nucleus, peroxisome	67.18	59.91
KRH50602	Soybean	plastid	67.01	59.85
CDY13996	Canola	plasma membrane	48.38	59.08
Bra002234.1-P	Field mustard	cytosol	48.38	58.96
PGSC0003DMT400062852	Potato	plastid	66.32	58.7
Solyc03g113690.1.1	Tomato	plastid	65.98	58.66
CDX92533	Canola	plastid	60.17	55.96
AT5G19410.2	Thale cress	plastid	60.34	55.77
TraesCS1D01G240600.1	Wheat	plasma membrane	62.22	55.74
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	61.88	55.44
HORVU1Hr1G056890.2	Barley	cytosol	62.05	55.42
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	61.71	55.2
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	60.68	51.15
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	60.17	50.43
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	56.24	48.74
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	42.56	47.98
GSMUA_Achr7P10690_001	Banana	cytosol	37.27	46.78
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	42.56	44.54
GSMUA_Achr9P00310_001	Banana	cytosol	38.12	43.13
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	28.55	40.34
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	34.7	31.97
GSMUA_Achr5P28450_001	Banana	plasma membrane	35.56	29.8
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	35.21	29.18
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	28.89	27.48
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	30.26	27.44
GSMUA_Achr1P26960_001	Banana	cytosol	11.11	25.9
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	28.21	25.58
GSMUA_Achr8P34440_001	Banana	plasma membrane	24.79	25.48
GSMUA_Achr2P02720_001	Banana	mitochondrion	25.81	25.38
GSMUA_Achr2P04580_001	Banana	plasma membrane	25.98	25.38
GSMUA_Achr11P...	Banana	plasma membrane	26.15	25.25
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	28.38	24.48
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	29.23	22.98
GSMUA_Achr1P26950_001	Banana	plasma membrane	7.69	22.73
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	34.19	22.25
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	27.01	22.1
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	27.35	21.48
GSMUA_Achr6P23160_001	Banana	plastid	26.84	21.36
GSMUA_Achr10P...	Banana	plasma membrane	23.42	20.45
GSMUA_Achr6P08820_001	Banana	plasma membrane	32.99	15.61
GSMUA_Achr1P19280_001	Banana	plasma membrane	25.3	13.92

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr2G06780_001	EnsemblPlants:GSMUA_Achr2P06780_001
EnsemblPlants:GSMUA_Achr2T06780_001	InterPro:IPR003439	UniProt:M0S5R9	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF158	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000295CA10	SEG:seg	:	:	:

Description

ABC transporter G family member 23 [Source:GMGC_GENE;Acc:GSMUA_Achr2G06780_001]

Coordinates

chr2:+:11491715..11493607

Molecular Weight (calculated)

65891.1 Da

IEP (calculated)

9.457

GRAVY (calculated)

0.278

Length

585 amino acids

Sequence
(BLAST)

001: MESLCLDVNS TLQYSSTSDS PPESSSPSSS VYQTSPPPPV KASNKLVVTN LCYTVLPEAS LIRSCFRRKH EPRAVEVLRS VSFVANSSEI LAVVGPSGAG
101: KSTLLRVISG RSGSSLFDPR SISLGDHPLT SSAQLRRICG FVTQEDNLLP LLTVKETLMF SAKFRLKGMS ERKMEERVEG LIRELRLEHV TDSYVGDAET
201: RGISGGERKR LSIGVDVIHD PPILLLDEPT SGLDSTSALQ VVQLLASMAR TRQQILILTI HQPSYRILQY VSSFLLLSHG KLAHYGSIQS LSQTISQLGF
301: KIPVRVNPLE FAMEITQQLE DYDDGYCSRI AEMRTLSWRF WKIIYRTKQL FLARTMQAIV GGLGLGTVYL RVKSDPDGIA KRLGLFAFSL SFLLSSTVEA
401: LPIFLQERRV LMRETSRRMY RVSSYMVANT VVFIPFLLVV ALLFAVPVYW LVGLNPSISA FMFFVLAVWM IVLMASSLVL FLSAVSPDFI LGNSLICTFL
501: GIFFLFSGYF IPKDSIPKYW IFMYYISLYR YPLDFLLINE YWSVRGKGLE KDTRWMDVGI MCCFFLAYRV LCWLLLVRKA SKTML

Best Arabidopsis Sequence Match ( AT5G19410.2 )
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Arabidopsis Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.