Factsheet for Os05t0384600-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	74.07	76.57
HORVU1Hr1G056890.2	Barley	cytosol	73.93	76.18
TraesCS1D01G240600.1	Wheat	plasma membrane	73.63	76.11
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	73.48	75.84
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	73.04	71.04
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	71.7	69.34
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	48.74	56.24
Bra002234.1-P	Field mustard	cytosol	37.48	52.71
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	48.74	52.47
CDY13996	Canola	plasma membrane	37.04	52.19
AT5G19410.2	Thale cress	plastid	47.56	50.71
PGSC0003DMT400062852	Potato	plastid	49.04	50.08
KRG89682	Soybean	cytosol, nucleus, peroxisome	48.59	50.0
Solyc03g113690.1.1	Tomato	plastid	48.74	50.0
KRH50602	Soybean	plastid	48.3	49.77
CDX92533	Canola	plastid	46.37	49.76
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	30.52	42.39
Os01t0615500-00	Rice	plastid	37.63	41.44
Os05t0120000-00	Rice	plasma membrane	31.41	31.18
Os05t0120200-01	Rice	plasma membrane	31.26	30.19
Os01t0836600-01	Rice	plasma membrane	30.52	27.5
Os07t0191600-04	Rice	nucleus, peroxisome, plasma membrane	28.0	27.23
Os03t0281900-01	Rice	cytosol, plasma membrane	29.63	25.41
Os11t0177400-01	Rice	plasma membrane	17.63	25.16
Os06t0607700-01	Rice	plasma membrane	24.15	23.69
Os08t0167000-01	Rice	cytosol, nucleus, plasma membrane	24.89	22.19
Os01t0121700-01	Rice	plasma membrane	21.78	22.01
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	23.41	20.49
Os09t0401100-01	Rice	extracellular	26.22	20.25
Os03t0282100-00	Rice	cytosol, nucleus, plastid	22.52	19.84

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:4338652	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:BAF17328.1	ProteinID:BAS93796.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EnsemblPlantsGene:Os05g0384600	EnsemblPlants:Os05t0384600-01	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF158
UniProt:Q0DIJ5	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0000E1249E	SEG:seg

Description

ABC TRANSPORTER G FAMILY MEMBER 13ABC transporter-like domain containing protein. (Os05t0384600-01);Similar to ATPase, coupled to transmembrane movement of substances. (Os05t0384600-02)

Coordinates

chr5:-:18575668..18578864

Molecular Weight (calculated)

72938.9 Da

IEP (calculated)

8.757

GRAVY (calculated)

0.119

Length

675 amino acids

Sequence
(BLAST)

001: MEDLSLSSEL DPALLSTSTS SSSPPDSASP SFSFYHPSPP NYTLAVSNLS CRDPRRGSGG AGLLSWLLGS FSTSSPPATG GAGLLNNVSF TASSSQILAV
101: VGPSGAGKST LLRILSGRGT GGEIAARPHA VVSVNGRAVT SRARLRRMCG FVTQDDNLLP LLTVRETILF AARFRLRSAV TARERGERVE ALMQELRLSE
201: VADSYVGGCG GAGGAPRGVS GGERKRVSIA VDIVHDPPVL LLDEPTSGLD SRSAMDVLSL LRDVARARRQ VVVLSIHQPS YRMLAYISSM LLLSRGAVAH
301: FGTLKSLEHS LSRLGHEIPM QLNPLELAME VTEQLEADHA RFGAALATTI HQHQHNKVID DEDESSGAGE HEHEHGYYCS RAVEVGALAV RCWRTMHRTK
401: ELFAARAAQA VIAGLGLGSV YFRIRPDPEG VALRLGLFAF SLSFLLSSTV EALPILLHER RVLMREASRR AYRLSSYVVA NALVFAPCLL AVSLLFSAPV
501: YFLAGLRATT QAFACFALAV WLIVLMASSL VLFLSAVSPD FVLGNSLICM SLGVFFLFSG YFIPRESIPR YWAFMYYVSM YRYPLDLLLI NEYGGSSSGR
601: CVAWAGGVCL RKGGDVLRGR GIDEGMSRRG WRWNGSGHVD DGCCGGKSEM ARWCERHWSS ACRSAAMRMT SSRCA

Best Arabidopsis Sequence Match ( AT5G19410.2 )
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Arabidopsis Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.