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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 2
  • mitochondrion 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:plasma membrane
 plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0120200-01 Rice plasma membrane 86.18 83.83
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 77.5 77.39
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 77.5 77.39
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 77.35 77.24
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 77.35 77.24
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 76.62 75.07
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 76.32 75.0
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 73.09 74.4
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 76.47 74.29
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 71.76 72.3
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 71.62 72.15
CDY44641 Canola plasma membrane 29.26 67.0
Bra005049.1-P Field mustard plasma membrane 29.26 67.0
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 76.62 66.03
Bra005051.1-P Field mustard plastid 57.35 63.52
CDX74853 Canola plastid 57.35 63.21
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 61.76 58.01
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 61.47 57.58
PGSC0003DMT400029838 Potato extracellular 58.82 57.55
Os01t0836600-01 Rice plasma membrane 63.38 57.54
CDX69629 Canola plastid 61.47 57.42
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 61.03 57.32
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 61.91 57.2
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 61.03 57.08
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 60.15 56.96
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 62.5 56.89
KRG92984 Soybean cytosol, peroxisome, plasma membrane 62.5 56.67
KRG95875 Soybean cytosol, peroxisome, plasma membrane 61.03 56.39
CDY02907 Canola cytosol, peroxisome, plasma membrane 52.5 56.22
KRH67592 Soybean plastid 60.59 56.13
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 60.59 55.98
Solyc04g010210.1.1 Tomato extracellular 58.68 55.88
Solyc05g054890.2.1 Tomato cytosol 61.62 55.87
AT2G39350.1 Thale cress cytosol 60.74 55.81
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 54.26 55.74
CDY09810 Canola plastid 61.47 55.59
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 60.74 55.51
AT3G53510.1 Thale cress plasma membrane 60.15 55.35
CDX93388 Canola plasma membrane 60.15 55.2
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 60.0 54.99
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 57.21 54.94
CDY18451 Canola cytosol, peroxisome, plasma membrane 59.85 54.85
CDX76121 Canola cytosol 37.94 54.78
CDX76119 Canola cytosol, peroxisome, plasma membrane 53.68 54.72
Solyc09g005970.1.1 Tomato plasma membrane 58.82 54.2
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 60.0 54.04
PGSC0003DMT400061466 Potato plasma membrane 58.82 53.98
CDY40201 Canola cytosol 55.88 53.67
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 55.15 53.65
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 55.74 53.53
CDX67624 Canola cytosol, peroxisome, plasma membrane 55.59 53.47
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 55.59 53.47
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 55.59 53.24
Os03t0281900-01 Rice cytosol, plasma membrane 61.47 53.11
HORVU5Hr1G021110.1 Barley cytosol 33.38 52.91
CDX73549 Canola cytosol, peroxisome, plasma membrane 58.82 52.91
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 56.18 52.69
CDY65003 Canola cytosol, peroxisome, plasma membrane 53.97 51.4
CDY37656 Canola cytosol, peroxisome, plasma membrane 53.68 51.19
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 53.82 51.19
CDX73404 Canola plasma membrane 56.47 48.67
CDY50899 Canola cytosol 21.32 43.54
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 59.26 42.6
Bra014774.1-P Field mustard plasma membrane 39.12 42.02
Os07t0191600-04 Rice nucleus, peroxisome, plasma membrane 40.59 39.77
Os06t0503100-01 Rice cytosol, peroxisome, plasma membrane 25.15 35.19
Os01t0615500-00 Rice plastid 31.32 34.75
CDX76122 Canola plasma membrane 61.18 32.45
Bra014776.1-P Field mustard cytosol 61.18 32.4
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.32 32.25
CDY02906 Canola plasma membrane 60.88 32.22
Os09t0401100-01 Rice extracellular 41.32 32.15
Os05t0384600-01 Rice cytosol, endoplasmic reticulum, peroxisome, plastid 31.18 31.41
Os11t0177400-01 Rice plasma membrane 20.15 28.96
Os06t0607700-01 Rice plasma membrane 27.5 27.18
Os01t0121700-01 Rice plasma membrane 25.0 25.45
Os08t0167000-01 Rice cytosol, nucleus, plasma membrane 27.79 24.97
Os03t0157400-01 Rice cytosol, peroxisome, plasma membrane 27.94 24.64
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:4337643InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSProteinID:BAF16402.2ProteinID:BAS92006.1ProteinID:EEE62136.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439EnsemblPlantsGene:Os05g0120000EnsemblPlants:Os05t0120000-00
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF294UniProt:Q0DL71SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0000F18BBB
RefSeq:XP_015638496.1SEG:seg::::
Description
ABC TRANSPORTER G FAMILY MEMBER 10Similar to Stigma/style ABC transporter. (Os05t0120000-00)
Coordinates
chr5:-:1042096..1044138
Molecular Weight (calculated)
74351.7 Da
IEP (calculated)
9.393
GRAVY (calculated)
0.310
Length
680 amino acids
Sequence
(BLAST)
001: MAILPGDCVV LDIDDAAAQS TPVPYALTFT DLSYTVGSRR AGLLPPLPTD APPAKALLDG ISGEARDGEV LAVMGASGSG KSTLLDALAG RIARGSLRGR
101: VELNGEALHG RRVRAISAYV MQDDVLYPML TVRETLMFAA EFRLPRALSP DKKRARVDAL IGQLGLARAA DTIVGDEAHR GVSGGERRRV SIGTDIVHDP
201: ILLFLDEPTS GLDSASAFMV VQVLRRIAQS GSVIVMTIHQ PSARILNILD RLLLLSRGRT VYAGSPSGLK PFFSVFGYPI PDNENLVEFA LDTIRELEHQ
301: PDGAAMLVKF SSRWQSSLGA LLDTKDDKDR SQRCTMPLEL AIAESVSRGK LVAGSGSGTL SSTSVPTYAN PWYVEVWVLM KRAFTNTRRM PELFVMRLGT
401: IMVTGFILAT IFWRLDDTPK GVQERLGFFA MAMSTMFYVC ADALPVFVQE RHIYLRETAH NAYRRLSYVV ANTAVAFPPL VVLSLAFAVT TFFAVRLSGG
501: GASFAFFALT VLASFWAGSG FVTFLSAVVP HVMLGYTVVV AILAYFLLFS GFFINRDRIP SYWIWFHYLS LVKYPYQAVL QNEFRDAARC FSRGVEMFDG
601: TPIGAMSKAV KLKVLDAIGA TLGAPLTAET CVVTGADVLA QQAVTDIGRW KCLLVTVAFG FFFRFLFYIV LHFGSKNKRR
Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.