Factsheet for Solyc09g005970.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400061466	Potato	plasma membrane	97.56	97.17
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.9	73.1
KRH67592	Soybean	plastid	69.65	70.03
AT3G53510.1	Thale cress	plasma membrane	68.97	68.88
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	68.43	68.61
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	65.85	67.69
Solyc05g054890.2.1	Tomato	cytosol	68.7	67.6
Solyc04g010210.1.1	Tomato	extracellular	65.31	67.51
CDX93388	Canola	plasma membrane	67.07	66.8
CDY18451	Canola	cytosol, peroxisome, plasma membrane	66.94	66.58
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.94	66.58
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	67.34	65.83
CDX73549	Canola	cytosol, peroxisome, plasma membrane	66.12	64.55
GSMUA_Achr5P28450_001	Banana	plasma membrane	59.89	63.32
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	60.57	63.31
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	61.38	60.97
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	55.42	60.06
Os05t0120200-01	Rice	plasma membrane	56.78	59.94
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	55.28	59.91
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	55.15	59.77
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	55.15	59.77
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	60.3	59.73
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	53.66	59.28
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	63.41	59.24
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	63.55	59.22
TraesCS3B01G387500.1	Wheat	plastid	60.7	59.18
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	60.57	59.13
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	60.57	59.05
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	60.57	59.05
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	63.69	59.05
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	60.43	58.99
Zm00001d042953_P001	Maize	plasma membrane	60.7	58.87
Os05t0120000-00	Rice	plasma membrane	54.2	58.82
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	55.28	58.79
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	55.01	58.67
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	63.28	58.67
Os01t0836600-01	Rice	plasma membrane	59.49	58.61
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	56.37	58.43
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	55.28	58.29
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	56.37	58.26
Zm00001d035553_P001	Maize	plasma membrane	56.1	57.98
Os03t0281900-01	Rice	cytosol, plasma membrane	61.38	57.56
EES17614	Sorghum	cytosol, peroxisome, vacuole	55.15	57.32
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	52.3	57.19
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	52.17	57.04
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	63.41	55.65
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.21	52.43
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	55.28	51.71
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	61.52	50.5
HORVU4Hr1G058070.2	Barley	cytosol	50.14	45.4
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	37.8	42.53
HORVU5Hr1G021110.1	Barley	cytosol	24.53	42.19
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	30.62	36.39
Solyc09g098410.1.1	Tomato	nucleus	34.82	35.25
Os03t0282100-00	Rice	cytosol, nucleus, plastid	35.5	34.2
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	28.46	34.2
Solyc07g053300.1.1	Tomato	cytosol	27.51	33.39
Solyc01g097430.2.1	Tomato	cytosol, nucleus	36.99	32.58
Solyc03g113690.1.1	Tomato	plastid	29.0	32.52
Solyc11g018690.1.1	Tomato	cytosol	14.91	32.16
GSMUA_Achr6P08820_001	Banana	plasma membrane	53.12	31.72
Solyc03g007690.1.1	Tomato	plastid	25.61	31.66
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	24.39	28.57
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.71	28.55
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.85	28.03
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	24.8	27.11
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.17	26.47
Solyc01g006720.2.1	Tomato	plastid	25.47	25.97
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.04	25.95
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	24.39	24.93
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	9.21	23.45
Solyc05g008350.2.1	Tomato	nucleus, plastid	21.95	22.82
Solyc07g065780.1.1	Tomato	mitochondrion	13.55	22.47

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:K4CQ87	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc09g005970.1
EnsemblPlants:Solyc09g005970.1.1	TMHMM:TMhelix	UniParc:UPI000276B515	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:665866..668082

Molecular Weight (calculated)

82236.8 Da

IEP (calculated)

9.616

GRAVY (calculated)

0.102

Length

738 amino acids

Sequence
(BLAST)

001: MSSLCGGDDM SSASDLPFLG PRNNMELQEF GRKPRHNVSI TLGELLKRFG DSAEEKNQVL ELGNISNYTT SPSSFPFVLS FHNLNYSVKV KSKISLPRWL
101: RRGDKDDELS SDKVLLNDIS GEAREGEIMA VLGASGSGKS TLIDALADRI SRESLKGNVT LNGEVLESKL LKVISAYVMQ DDLLFPMLTV EETLMFSAEF
201: RLPRTLSKSK KNARVQALID QLGLRNAAKT VIGDEGHRGV SGGERRRVSI GIDIIHDPIV LFLDEPTSGL DSTSAYMVVK VLQRIAQSGS IVIMSIHQPS
301: YRILSLLDRL IILSRGHTVL TSPPSCLQQF FADFGNPIPE NENRIEFALD FIRELEGTPN GTKTLMEFNK IWQRGKNSTT STSSFYNGPK PSLKDAISAS
401: VSRGKLVSGA TNNIDPNLSS SNVPKFANPF WVDMVVIAKR SMLNSMRMPE LFGMRFGAVV VTGIILATIF WKLDNSPKGV QERLGFFAFA MSTTFYTCAE
501: AIPVFLQERY IFMRETAYNA YRRSSYVVSH AIISLPSILV LSIAFAVTTY WSVGLAGGVS GFLYFLLFLV ASFWAGSSFV TFLSGVIYNI MMAYTVVVAV
601: LAYFFLFSGF FISRDRIPPY WIWFHYMSLV KYPYQGVLQN EFSDPNKCFV KGVQLFDASP LRAVPEALKI KLLQNMSKTL GMNITNTTCL TTGSDILKQS
701: GVTDLNKWTC FWITIALGFF FRILFYFALL VGSKNKRR

Best Arabidopsis Sequence Match ( AT3G53510.1 )
(BLAST)

001: MSGLFGILSP AKRVNGDGLP LFYNIHKSVE LQRCHRDTAR VSVTLAELLM SVEDEGDDQS RAMDIAVASN FWSSVPSSRV PSSSPFVLSF KDLTYSVKIK
101: KKFKPFPCCG NSPFDGNDME MNTKVLLNGI SGEAREGEMM AVLGASGSGK STLIDALANR ISKESLRGDI TLNGEVLESS LHKVISAYVM QDDLLFPMLT
201: VEETLMFSAE FRLPSSLSKK KKKARVQALI DQLGLRNAAK TVIGDEGHRG VSGGERRRVS IGTDIIHDPI ILFLDEPTSG LDSTSAYMVV KVLQRIAQSG
301: SIVIMSIHQP SYRILGLLDK LIFLSRGNTV YSGSPTHLPQ FFSEFGHPIP ENENKPEFAL DLIRELEDSP EGTKSLVEFH KQWRAKQTSS QSRRNTNVSL
401: KDAISASISR GKLVSGATNL RSSFQTFANP FWTEMLVIGK RSILNSRRQP ELFGIRLGAV LVTGMILATI FWKLDNSPRG IQERLGFFAF AMSTTFYTCA
501: EAIPVFLQER YIFMRETAYN AYRRSSYVLA HTIISIPALI ILSAAFAAST FSAVGLAGGS EGFLFFFFTI LTAFWAGSSF VTFLSGVVSH VMIGFTVVVA
601: ILAYFLLFSG FFISRDRIPL YWIWFHYLSL VKYPYEGVLQ NEFEDPTKCF VRGIQMFDNS PLGQVPTAVK ISLLKSMSGV LGINVTAETC VTTGIDILKQ
701: QGITEISKWN CLWITVAWGF FFRVLFYFTL LIGSKNKRR

Arabidopsis Description

ABCG20ABC transporter G family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFG8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.