Factsheet for Solyc05g056470.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059944	Potato	cytosol, peroxisome, plasma membrane	95.6	91.58
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.52	68.19
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	67.26	66.61
CDX89610	Canola	cytosol, peroxisome, plasma membrane	65.15	66.12
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	69.87	66.1
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	55.86	66.09
CDX93119	Canola	cytosol, peroxisome, plasma membrane	64.98	65.95
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	69.54	65.29
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.78	64.87
KRH64027	Soybean	extracellular	67.26	64.53
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	66.29	62.71
GSMUA_Achr9P00310_001	Banana	cytosol	51.3	60.93
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	22.48	50.18
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.72	47.18
EES01897	Sorghum	cytosol, plasma membrane, plastid	51.63	47.1
TraesCS2A01G574700.1	Wheat	plasma membrane	48.86	46.15
TraesCS2B01G612200.1	Wheat	plasma membrane	50.65	46.07
TraesCS2D01G585300.1	Wheat	plasma membrane	50.49	45.99
Solyc07g053300.1.1	Tomato	cytosol	45.28	45.72
HORVU2Hr1G124860.3	Barley	nucleus, peroxisome, plastid	40.72	45.13
Zm00001d026706_P005	Maize	plasma membrane	50.65	41.47
Solyc03g007690.1.1	Tomato	plastid	39.74	40.87
Solyc03g113690.1.1	Tomato	plastid	42.35	39.51
Solyc11g018690.1.1	Tomato	cytosol	16.78	30.12
Solyc09g005970.1.1	Tomato	plasma membrane	34.2	28.46
Solyc04g010210.1.1	Tomato	extracellular	32.74	28.15
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	32.57	27.86
Solyc05g054890.2.1	Tomato	cytosol	33.88	27.73
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	27.36	27.41
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	28.01	27.39
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	28.01	27.3
Solyc09g098410.1.1	Tomato	nucleus	32.25	27.16
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	27.36	24.89
Solyc01g097430.2.1	Tomato	cytosol, nucleus	33.39	24.46
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.73	24.46
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.57	23.97
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	11.24	23.79
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	27.36	23.27
Solyc05g008350.2.1	Tomato	nucleus, plastid	26.71	23.1
Solyc01g006720.2.1	Tomato	plastid	26.87	22.79
Solyc07g065780.1.1	Tomato	mitochondrion	13.84	19.1

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4C2X1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF230	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc05g056470.1	EnsemblPlants:Solyc05g056470.1.1
TMHMM:TMhelix	UniParc:UPI000276591D	SEG:seg	:	:	:

Description

ABC transporter G family member 5 [Source:Projected from Arabidopsis thaliana (AT2G13610) UniProtKB/Swiss-Prot;Acc:Q9SIT6]

Coordinates

chr5:-:65747088..65748932

Molecular Weight (calculated)

68898.5 Da

IEP (calculated)

8.550

GRAVY (calculated)

0.340

Length

614 amino acids

Sequence
(BLAST)

001: MKKQGCEIEA IGINYTIYTH KRETPFSFLS RKQHNKCIKG VEELEKDRHV LKDVNCRAKR GEILAIVGPS GAGKSTFLEV LAGKIEPDSG SIFVNQKPVD
101: KASFNKISGY VTQKDTLFPL LTVEETLSFT AKLRLKLGPK ELSSRVKCLI QELGLEHVGG ARIGDDRIRG ISGGERRRVS IGVELIHDPG VLILDEPTSG
201: LDSTSALQII DMLKTMAVTR DRTIILSIHQ PCFRIMKLFN SILLLANGTI LHHGTIEQLS LRLILLGLDL PLHVNILEFA IESIDIIQTL LPQSALMIKN
301: SGNFTLHQLF QESKQDSLSM PIHVGFANSS LQEIVILTIR FWKIIYRTKE LFGFKTLQML LSGVVLGSIF YNLEDDLVGA QARVGLFAFV LTYLLSSTTE
401: ALPIFLQERE ILMKETCCGS YRVSSYVIAN SLVYLPFLLI LALLFSTPLY WMVGLNKHLM AFMHFLLLIW LILYTANSIV VCCSALVPNF IIGNSLVCAM
501: MGSCALFSGY FVSKNEIPNY WIVMHYVSLF KYPFEGFLIN EFSGSGKCLQ YMFGMCLASG DQVLKDEGYG GEESRRKNLI IMVCFIMLYR FISYVILRVR
601: CTSKGGFKNV FISI

Best Arabidopsis Sequence Match ( AT2G13610.1 )
(BLAST)

001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA

Arabidopsis Description

ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.