Factsheet for Solyc04g070970.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002062	Potato	cytosol	96.26	91.45
GSMUA_Achr8P34440_001	Banana	plasma membrane	53.46	67.84
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.57	59.15
Solyc01g006720.2.1	Tomato	plastid	56.65	56.49
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	40.03	46.02
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	38.64	45.51
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	38.78	44.44
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	40.86	43.7
Solyc11g018690.1.1	Tomato	cytosol	20.64	43.57
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	17.17	42.76
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	37.95	42.41
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	37.95	41.83
Solyc07g065780.1.1	Tomato	mitochondrion	23.13	37.53
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.27	27.36
Solyc07g053300.1.1	Tomato	cytosol	22.71	26.97
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	22.71	26.41
Solyc09g005970.1.1	Tomato	plasma membrane	24.93	24.39
Solyc04g010210.1.1	Tomato	extracellular	23.68	23.95
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.68	23.82
Solyc03g007690.1.1	Tomato	plastid	19.67	23.79
Solyc05g008350.2.1	Tomato	nucleus, plastid	23.27	23.66
Solyc05g054890.2.1	Tomato	cytosol	24.52	23.6
Solyc03g113690.1.1	Tomato	plastid	20.78	22.8
Solyc09g098410.1.1	Tomato	nucleus	22.99	22.77
Solyc01g097430.2.1	Tomato	cytosol, nucleus	22.71	19.57

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4BT89	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF286	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc04g070970.2	EnsemblPlants:Solyc04g070970.2.1
TMHMM:TMhelix	UniParc:UPI000276664D	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:-:57780450..57784609

Molecular Weight (calculated)

80916.7 Da

IEP (calculated)

8.964

GRAVY (calculated)

-0.011

Length

722 amino acids

Sequence
(BLAST)

001: MGKELDHSKS LDKEEAVIMQ NIDEDEIFPP EKNRNSLCIR KIEGNKKTKT RLMKMRSLDS AEESPVHGKS LCLARSFSSH FLINIDEMMS DVGNEKENNI
101: LKSKDQEDDD SCSWNRIQIE PTLRIRLKFQ DVKYTVALKG VENSDTEKCI LQGVSGSACP GEILALMGPS GGGKTTLLKL LSGKVKNDSG TITFNDQPYN
201: KSLKQRIGFV LQDDVVFPHL TVKETLTYAA LLRLPNTLSK EQKKERAIGV INELGLERCQ DTIIGGAFVR GVSGGERKRV CIGNEILLNP SLLFLDEPTS
301: GLDSTTALRI MQMLRNIARA GKTVVTTIHQ PSSRLFSRFD KLILLGQGSS LYFGKASEAM LYFSSIGCSP LIAMNPAEFL IDLANGNITE KSIPSELKEK
401: LLPGHHHFKK QNEGPSPADV HEYFVGAYES RVANIEKLKL LKHGLIEEDS EVQSWPNLRD SGATWCQQFT ILFGRSLKER NHEYFSSLRI TQVIATAIVV
501: GLLWWNSDTS FPERISDQAG LLFFVSVFWG FFPLFTAIFT FPQERAMLVK ERSVNMYKLS AYFIARITTD LLLDLVLPVT FLLIVYFMVG LKLTFNAFCL
601: TLLTILLSII AAQGLGLAIG AAFMDVKKAT TFASVILMTF MLSGGFFVQE VPAFMSWVRY ISINYHTYRL LLKIQFKSLR NSKYGSVDDS SGVEVGAMLV
701: MVIGYRVLAY FLLRKMKPRT SK

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.