Factsheet for Solyc03g007690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053843	Potato	cytosol, plasma membrane, plastid	97.82	97.99
VIT_16s0050g01620.t01	Wine grape	cytosol	75.38	75.38
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	57.62	73.19
KRG91599	Soybean	cytosol, plastid	67.17	70.23
CDX94418	Canola	plastid	66.83	69.63
Bra013916.1-P	Field mustard	plastid	66.33	69.11
CDX89396	Canola	plasma membrane	66.33	69.11
CDY27043	Canola	plastid	68.01	68.93
Bra022614.1-P	Field mustard	plastid	67.67	68.59
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	67.34	68.25
CDX96159	Canola	plastid	67.17	68.08
AT4G25750.1	Thale cress	plasma membrane	65.49	67.76
GSMUA_Achr7P10690_001	Banana	cytosol	51.09	65.45
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	59.3	63.33
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	56.28	54.37
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	56.28	53.16
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	43.05	52.88
TraesCS7A01G342000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	55.44	50.0
HORVU7Hr1G081250.1	Barley	mitochondrion	54.94	49.7
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	54.94	49.55
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	54.44	49.09
Solyc03g113690.1.1	Tomato	plastid	47.74	43.31
Solyc07g053300.1.1	Tomato	cytosol	42.21	41.45
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	40.87	39.74
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	41.04	39.45
Solyc04g010210.1.1	Tomato	extracellular	32.83	27.45
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	32.83	27.3
Solyc05g054890.2.1	Tomato	cytosol	33.33	26.53
Solyc11g018690.1.1	Tomato	cytosol	15.08	26.32
Solyc09g098410.1.1	Tomato	nucleus	31.99	26.2
Solyc09g005970.1.1	Tomato	plasma membrane	31.66	25.61
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.63	24.96
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	26.3	24.92
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	25.8	24.52
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.96	23.66
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	26.63	23.56
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.46	23.53
Solyc01g097430.2.1	Tomato	cytosol, nucleus	31.32	22.32
Solyc07g065780.1.1	Tomato	mitochondrion	15.08	20.22
Solyc01g006720.2.1	Tomato	plastid	24.46	20.17
Solyc05g008350.2.1	Tomato	nucleus, plastid	23.62	19.86
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.79	19.67
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	9.05	18.62

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4BEJ1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF290	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc03g007690.1	EnsemblPlants:Solyc03g007690.1.1
TMHMM:TMhelix	UniParc:UPI0002768319	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:2213503..2215296

Molecular Weight (calculated)

66460.7 Da

IEP (calculated)

9.531

GRAVY (calculated)

0.303

Length

597 amino acids

Sequence
(BLAST)

001: MEIESSPTPP SPPLKTYKLT ASSIGYSKST TISPALLFKP CETPPPINIL KNISFTAYPS QILGIVGPSG AGKSTLLDIL AAGTSPTSGT LLLNSLPLHS
101: PSTFRKLSAY VPQHDCSLPQ LTVSETFAFS ARLLNPKLND VSCIVDSLLA ELRLTHLAHT RLAHGLSGGE RRRVSIGLSL LHDPAILLLD EPTSGLDSNS
201: ALNVMQTLRS ITDSRQRTVL LSIHQPSFKI LATIDKILLL SKGTVVHHGT LSSLEEFLLE NGFTVPPQLN SLEYAMEMLS QLNDKKPITP ISSPHQNPTT
301: TPVPEASKTG EIKYRSSRLH EIAVLYSRFW KIIYRTKQLL LTNTLQALGV GLVLGTIYIN IGFGKAGIEK RFGLFAFTLT FLLSSTTETL PIFINERPIL
401: LRETSSGVYR LSSYLIANTL VFLPYLLVIA ILYSISLYFL VGLCYSWQAF TYFVLTIWVI VLMANSFVLF LSSVAPNYIA GTSLVTLLLA GSFLFSGYFI
501: TKETMPKFWT MLHYLSMYKY GLDALLINEY SCLVAKCLIW YDEKNRVCMV SGSDVLDKRG LHENERWTNI YILIGFFVFY RLLWLIVLIR RVSRSKK

Best Arabidopsis Sequence Match ( AT5G52860.1 )
(BLAST)

001: MEIPPSPPPE TAAYTLTTSS ISYTIPKTSL SLLRFPATEP PSFILRNITL TAHPTEILAV VGPSGAGKST LLDILASKTS PTSGSILLNS IPINPSSYRK
101: ISSYVPQHDS FFPLLTVSET FSFAACLLLP NPSIVSETVT SLLSELNLTH LSHTRLAQGL SGGERRRVSI GLSLLHDPCF LLLDEPTSGL DSKSAFDVIH
201: ILKSIAVSRQ RTVILSIHQP SFKILSIIDR LLLLSKGTVV YHGRLDSLEG FLLFKGFTVP PQLNSLEYAM EILQELRESD GNTDATALPS IENRKQREKQ
301: SIVRYRKSRI TEISLLARRF WKIIYRTRQL LLTNALEALV VGLVLGTIYI NIGIGKAGIE KRFGMFAFTL TFLLSSTTET LPIFINERPI LLRETSSGIY
401: RLSSHILANT LVFLPYLFVI SIIYSVSVYF LIGLCPTWQA FGYFVLVIWI ILLMANSFVL FLSSLAPNYI TGTSLVTILL AAFFLFSGYF ISKESLPKYW
501: LFMYFFSMYK YALDALLINE YSCLASKCLV WLEEAQTKIC MVTGGDVLKK KGLHEKQRWF NVYVLLGFFV LYRVLCFLAL LRRVSGSKR

Arabidopsis Description

ABCG8ABC transporter G family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX5]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.