CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	72.33	87.87
VIT_16s0050g01620.t01	Wine grape	cytosol	74.61	71.36
PGSC0003DMT400053843	Potato	cytosol, plasma membrane, plastid	70.58	67.62
Solyc03g007690.1.1	Tomato	plastid	70.23	67.17
Bra022614.1-P	Field mustard	plastid	67.78	65.7
CDX94418	Canola	plastid	65.85	65.62
CDY27043	Canola	plastid	67.6	65.53
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	67.25	65.2
CDX89396	Canola	plasma membrane	65.32	65.1
CDX96159	Canola	plastid	66.9	64.86
Bra013916.1-P	Field mustard	plastid	64.97	64.75
AT4G25750.1	Thale cress	plasma membrane	65.32	64.64
GSMUA_Achr7P10690_001	Banana	cytosol	47.46	58.15
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	54.64	55.81
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	56.39	52.1
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	56.74	51.27
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	42.21	49.59
TraesCS7A01G342000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	56.74	48.94
HORVU7Hr1G081250.1	Barley	mitochondrion	56.39	48.79
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	56.22	48.49
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	55.87	48.19
KRH50602	Soybean	plastid	46.41	40.46
KRG89682	Soybean	cytosol, nucleus, peroxisome	46.41	40.4
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	40.46	37.87
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	40.46	37.81
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	39.4	36.29
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	41.51	36.24
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	41.16	36.21
KRH64027	Soybean	extracellular	39.4	35.16
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	33.1	25.68
KRH67592	Soybean	plastid	32.57	25.34
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	32.57	24.8
KRH39507	Soybean	cytosol	30.65	23.97
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	27.85	23.7
KRH20507	Soybean	cytosol	24.52	22.26
KRH55354	Soybean	cytosol, peroxisome, plasma membrane	23.82	21.79
KRH41868	Soybean	cytosol	30.12	21.66
KRH34992	Soybean	cytosol, plasma membrane, plastid	25.22	21.52
KRH60557	Soybean	cytosol	29.77	21.28
KRH22136	Soybean	cytosol, peroxisome, plasma membrane	23.29	21.21
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	24.17	21.2
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	24.69	21.04
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	24.17	21.04
KRG92003	Soybean	cytosol	25.04	20.97
KRH75541	Soybean	cytosol, peroxisome, plasma membrane, plastid	24.87	20.94
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	22.77	20.87
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	23.99	20.79
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	24.87	20.76
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	23.99	20.76
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	24.52	20.47
KRH46415	Soybean	plasma membrane	17.34	20.25
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	23.99	20.09
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	23.99	19.97
KRH14200	Soybean	cytosol	23.82	19.83
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	23.99	18.56
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	23.99	18.44
KRH35792	Soybean	plasma membrane	23.12	18.21
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	23.47	18.21
KRH68048	Soybean	plastid	23.29	17.97
KRG90976	Soybean	plasma membrane	22.24	17.76

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EMBL:ACUP02012692	EnsemblPlantsGene:GLYMA_20G163500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	UniProt:I1NGY9	InterPro:IPR003439	EnsemblPlants:KRG91599	ProteinID:KRG91599	ProteinID:KRG91599.1
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF290	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002948CD8	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:40099946..40101746

Molecular Weight (calculated)

63591.1 Da

IEP (calculated)

9.776

GRAVY (calculated)

0.372

Length

571 amino acids

Sequence
(BLAST)

001: MEDPSESPPP LKTYKLTATS ISYTKSTTTK PSFSSLFFTA CTNTPPTYIL KDISLTALPS QILAVVGPSG AGKSTLLDIL AARTLPSHGT LLLNSAPLVP
101: STFRKLSSYV PQHDHCLPLL TVSETFLFAA KLLKPKTSNL AATVSSLLSE LRLTHLSNTR LAHGLSGGER RRVSIGLSLL HDPAVLLLDE PTSGLDSTSA
201: FKVMRILKQT CTTRNRTIIL SIHQPSFKIL ACIDRILLLS KGTVVHHGSV ATLHAFLHSS GFTVPHQLNA LEYAMEILSQ LNEVKPVTPP SIPESPQSSI
301: STSSVSEGGA RSSREIIRYR SSRVHEIFTL YSRFWKIIYR TRQLLLPNTA EALLVGLVLG TIYINIGFDK EGIEKRFGLF AFLSRLSSYL IANTLVFLPY
401: LFVIAVIYSI PVYFLVGLCA SWLSFAYFVL VIWVIVLMAN SFALFLSSLA PNYIAGTSLL TVLLAAFFLF SGYFISKESL PKYWLFMHFF SMYKYALDAL
501: LINEYSCLVS RCLIWYQENE QCMVTGGDVL QKRGLKESER WTNVYFLLGF FLLYRVLCFL VLARRVSRSK T

Best Arabidopsis Sequence Match ( AT5G52860.1 )
(BLAST)

001: MEIPPSPPPE TAAYTLTTSS ISYTIPKTSL SLLRFPATEP PSFILRNITL TAHPTEILAV VGPSGAGKST LLDILASKTS PTSGSILLNS IPINPSSYRK
101: ISSYVPQHDS FFPLLTVSET FSFAACLLLP NPSIVSETVT SLLSELNLTH LSHTRLAQGL SGGERRRVSI GLSLLHDPCF LLLDEPTSGL DSKSAFDVIH
201: ILKSIAVSRQ RTVILSIHQP SFKILSIIDR LLLLSKGTVV YHGRLDSLEG FLLFKGFTVP PQLNSLEYAM EILQELRESD GNTDATALPS IENRKQREKQ
301: SIVRYRKSRI TEISLLARRF WKIIYRTRQL LLTNALEALV VGLVLGTIYI NIGIGKAGIE KRFGMFAFTL TFLLSSTTET LPIFINERPI LLRETSSGIY
401: RLSSHILANT LVFLPYLFVI SIIYSVSVYF LIGLCPTWQA FGYFVLVIWI ILLMANSFVL FLSSLAPNYI TGTSLVTILL AAFFLFSGYF ISKESLPKYW
501: LFMYFFSMYK YALDALLINE YSCLASKCLV WLEEAQTKIC MVTGGDVLKK KGLHEKQRWF NVYVLLGFFV LYRVLCFLAL LRRVSGSKR

Arabidopsis Description

ABCG8ABC transporter G family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX5]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.