CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	94.72	94.44
KRH75541	Soybean	cytosol, peroxisome, plasma membrane, plastid	76.39	76.84
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	69.35	75.92
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	73.9	73.68
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.65	70.27
CDY51602	Canola	plastid	65.25	66.82
AT3G25620.2	Thale cress	cytosol, nucleus, plasma membrane, plastid	65.69	66.67
CDY48079	Canola	plastid	64.66	66.32
CDY46506	Canola	cytosol, peroxisome, plasma membrane	64.81	66.17
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.52	65.87
PGSC0003DMT400019318	Potato	cytosol, nucleus, peroxisome	64.22	64.89
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	63.78	64.44
CDX99764	Canola	cytosol, peroxisome, plasma membrane	64.08	63.8
Bra025152.1-P	Field mustard	plastid	43.4	59.8
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	54.69	56.52
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	54.55	56.45
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	54.25	56.4
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	53.67	56.22
KRH22136	Soybean	cytosol, peroxisome, plasma membrane	50.59	55.02
KRH55354	Soybean	cytosol, peroxisome, plasma membrane	47.51	51.92
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	47.07	47.91
KRH34992	Soybean	cytosol, plasma membrane, plastid	46.04	46.94
KRH20507	Soybean	cytosol	42.67	46.26
KRH46415	Soybean	plasma membrane	28.45	39.67
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	39.59	39.59
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	42.67	39.43
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	39.59	39.36
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	42.38	39.27
KRH14200	Soybean	cytosol	39.44	39.21
KRH68048	Soybean	plastid	42.52	39.19
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	42.38	38.9
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	25.22	28.2
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	24.93	27.82
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	23.61	25.97
KRG89682	Soybean	cytosol, nucleus, peroxisome	24.93	25.91
KRH50602	Soybean	plastid	24.78	25.8
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	24.34	25.58
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	24.49	25.54
KRH64027	Soybean	extracellular	23.61	25.16
KRG91599	Soybean	cytosol, plastid	20.97	25.04
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	17.16	24.89
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	26.25	24.32
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	23.9	24.29
KRH67592	Soybean	plastid	26.1	24.25
KRH35792	Soybean	plasma membrane	25.22	23.72
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	25.95	23.6
KRG90976	Soybean	plasma membrane	24.63	23.5
KRH39507	Soybean	cytosol	24.93	23.29
KRH41868	Soybean	cytosol	25.81	22.17
KRH60557	Soybean	cytosol	25.37	21.65

Protein Annotations

EntrezGene:100783696	MapMan:11.4.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02012722	EnsemblPlantsGene:GLYMA_20G184900	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	UniProt:I1NHK4	InterPro:IPR003439	EnsemblPlants:KRG92003
ProteinID:KRG92003	ProteinID:KRG92003.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF303	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000233DA76	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:42289035..42294097

Molecular Weight (calculated)

75891.4 Da

IEP (calculated)

8.503

GRAVY (calculated)

0.027

Length

682 amino acids

Sequence
(BLAST)

001: MMPPEQETTI ATNIPAITTR QETSSVHHES EGSNTNKIKP SLELDDNGIP PQQQTQPTTP PPPSRFSVLH QSLRPITLKF EDVSYTITFE SQKKKGCVLR
101: KESKLRRKVL TGVTGVANPG ELTAMLGPSG SGKTTLLTAL AGRLAGKVSG TITYNGHTDP TFVKRKVGFV PQEDVLYPHL TVLETLTYAA LLRLPKSLSR
201: EEKKEHAEMV ITELGLTRCR NSPVGGCMAL FRGISGGERK RVSIGQEMLV NPSLLFVDEP TSGLDSTTAQ LIVSVLRGLA LAGRTVVTTI HQPSSRLYRM
301: FDKVVVLSDG YPIYSGQAGR VMDYLGSVGY VPAFNFMNPA DFLLDLANGV VADVKHDDQI DHHEDQASVK QSLMSSFKKN LYPALKEDIH QNNTDPSALI
401: SGTPRRCDNH WTSSWWEQFR VLLKRGLQER RHESFSGLRI FQVLSVSILS GLLWWHSDPS HVQDQVGLLF FFSIFWGFFP LFNAIFAFPL ERPMLIKERS
501: SGMYKLSSYY AARMVGDLPM ELVLPTIFIT ISYWMGGLNP SLVTFVLTLL IMLFNVLVSQ GIGLALGAIL MDVKQATSLA SVTMLVFLLA GGYYIQQMPA
601: FIAWLKYISF SHYCYKLLVG VQYSVNEVYE CGQGLHCRVR DFPAIKCLEL EDTMWGDVAA LTVMLIGYRV VAYLALRMGQ PH

Best Arabidopsis Sequence Match ( AT3G25620.2 )
(BLAST)

001: MMPPNEQESS FPKTPSANRH ETSPVQENRF SSPSHVNPCL DDDNDHDGPS HQSRQSSVLR QSLRPIILKF EELTYSIKSQ TGKGSYWFGS QEPKPNRLVL
101: KCVSGIVKPG ELLAMLGPSG SGKTTLVTAL AGRLQGKLSG TVSYNGEPFT SSVKRKTGFV TQDDVLYPHL TVMETLTYTA LLRLPKELTR KEKLEQVEMV
201: VSDLGLTRCC NSVIGGGLIR GISGGERKRV SIGQEMLVNP SLLLLDEPTS GLDSTTAARI VATLRSLARG GRTVVTTIHQ PSSRLYRMFD KVLVLSEGCP
301: IYSGDSGRVM EYFGSIGYQP GSSFVNPADF VLDLANGITS DTKQYDQIET NGRLDRLEEQ NSVKQSLISS YKKNLYPPLK EEVSRTFPQD QTNARLRKKA
401: ITNRWPTSWW MQFSVLLKRG LKERSHESFS GLRIFMVMSV SLLSGLLWWH SRVAHLQDQV GLLFFFSIFW GFFPLFNAIF TFPQERPMLI KERSSGIYRL
501: SSYYIARTVG DLPMELILPT IFVTITYWMG GLKPSLTTFI MTLMIVLYNV LVAQGVGLAL GAILMDAKKA ATLSSVLMLV FLLAGGYYIQ HIPGFIAWLK
601: YVSFSHYCYK LLVGVQYTWD EVYECGSGLH CSVMDYEGIK NLRIGNMMWD VLALAVMLLL YRVLAYLALR NL

Arabidopsis Description

ABCG21ABC transporter G family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA72]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.