CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	94.01	93.75
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.8	74.59
AT3G53510.1	Thale cress	plasma membrane	73.3	72.8
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	72.07	70.53
PGSC0003DMT400061466	Potato	plasma membrane	70.44	69.77
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.44	69.68
Solyc09g005970.1.1	Tomato	plasma membrane	70.03	69.65
CDX93388	Canola	plasma membrane	70.3	69.64
CDY18451	Canola	cytosol, peroxisome, plasma membrane	70.3	69.54
CDX73549	Canola	cytosol, peroxisome, plasma membrane	70.57	68.52
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	69.35	67.42
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	63.76	66.29
GSMUA_Achr5P28450_001	Banana	plasma membrane	61.44	64.61
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	64.03	63.26
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	63.49	62.55
TraesCS3B01G387500.1	Wheat	plastid	64.44	62.48
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	64.31	62.43
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	64.31	62.43
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	64.31	62.35
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	64.31	62.35
Zm00001d042953_P001	Maize	plasma membrane	64.44	62.16
Os05t0120200-01	Rice	plasma membrane	59.13	62.09
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.49	61.97
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	57.36	61.82
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.22	61.67
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.22	61.67
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	66.35	61.65
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	66.08	61.24
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	66.35	61.18
Os01t0836600-01	Rice	plasma membrane	62.4	61.15
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	57.63	61.13
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	66.21	61.06
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	55.45	60.93
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	57.36	60.66
Os05t0120000-00	Rice	plasma membrane	56.13	60.59
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	57.77	60.57
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	58.86	60.5
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	58.31	60.11
EES17614	Sorghum	cytosol, peroxisome, vacuole	58.04	60.0
Os03t0281900-01	Rice	cytosol, plasma membrane	64.17	59.85
Zm00001d035553_P001	Maize	plasma membrane	58.04	59.66
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	53.95	58.67
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	53.68	58.37
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	66.08	57.67
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.39	55.39
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	56.95	52.98
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	63.22	51.61
HORVU4Hr1G058070.2	Barley	cytosol	51.5	46.38
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	39.78	44.51
HORVU5Hr1G021110.1	Barley	cytosol	24.93	42.66
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	30.25	36.39
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	33.24	36.36
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	30.25	36.33
KRH39507	Soybean	cytosol	35.83	36.03
KRH60557	Soybean	cytosol	38.69	35.54
Os03t0282100-00	Rice	cytosol, nucleus, plastid	36.92	35.38
KRH41868	Soybean	cytosol	37.74	34.89
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	29.29	34.68
KRH64027	Soybean	extracellular	29.97	34.38
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	30.25	34.21
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	30.25	33.95
GSMUA_Achr6P08820_001	Banana	plasma membrane	56.95	33.82
KRG89682	Soybean	cytosol, nucleus, peroxisome	29.56	33.08
KRG91599	Soybean	cytosol, plastid	25.34	32.57
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	20.84	32.55
KRH50602	Soybean	plastid	28.47	31.91
KRH22136	Soybean	cytosol, peroxisome, plasma membrane	25.07	29.35
KRH55354	Soybean	cytosol, peroxisome, plasma membrane	24.66	29.01
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	25.34	27.76
KRH34992	Soybean	cytosol, plasma membrane, plastid	25.07	27.5
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	24.25	27.34
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	24.25	27.13
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	24.25	27.01
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	24.25	26.97
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	26.57	26.42
KRH20507	Soybean	cytosol	22.62	26.39
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	26.43	26.36
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	26.57	26.25
KRG92003	Soybean	cytosol	24.25	26.1
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	24.25	26.02
KRH75541	Soybean	cytosol, peroxisome, plasma membrane, plastid	23.98	25.96
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	24.25	25.95
KRH68048	Soybean	plastid	26.16	25.95
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	23.98	25.81
KRH14200	Soybean	cytosol	23.98	25.66
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	21.66	25.52
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	23.43	25.15
KRH46415	Soybean	plasma membrane	16.35	24.54
KRG90976	Soybean	plasma membrane	22.21	22.8
KRH35792	Soybean	plasma membrane	22.48	22.76

Protein Annotations

EntrezGene:100803426	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EMBL:ACUP02002069	EnsemblPlantsGene:GLYMA_03G175300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	UniProt:I1JPG2	InterPro:IPR003439	EnsemblPlants:KRH67592	ProteinID:KRH67592
ProteinID:KRH67592.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002336F7E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:38882403..38885065

Molecular Weight (calculated)

81603.0 Da

IEP (calculated)

9.699

GRAVY (calculated)

0.115

Length

734 amino acids

Sequence
(BLAST)

001: MSRLTPPPPP PPNPVLQDRL PFFNQSMELV NPPTRTRSRT LGDLLKRVQD AQNDIPLTPP HHVLDLSSSS TTHPFVLSFT NLTYSVNLRR KFTFFPATTI
101: STPDHETKPN GTKTLLNDIS GEAKDGEIMA VLGASGSGKS TLIDALADRI SKESLKGTVT LNGDVLESSL LKVISAYVMQ DDLLFPMLTV EETLMFAAEF
201: RLPRSFSKSK KKARVQALID QLGLRAAATT VIGDEGHRGV SGGERRRVSI GTDIIHDPIV LFLDEPTSGL DSTSAFMVVK VLQRIAQSGS IVIMSIHQPS
301: YRILSLLDHL IFLSHGNTVF SGSPANLPGF FSEFGHPIPE NENRTEFALD LIRELEQEPT GTKSLVDFNK SWQLKNKNQA QNGAKPKLSL KDAISASISR
401: GKLVSGTKNN NSTALVSVPA FANPFWMEML VIGKRSLTNS MRMPELFGIR LVAVLVTGAI LATIFFHLDD SPKGVQERVG FFAFAMSTTF YTCAEAMPVF
501: LQERYIFMRE TAHNAYRRSS YVLVHAIISL PSLLFLSLAF AATTFWAVGL AGGSSGFLFY FLTILASFWA GNSFVTFLSG VVSHVMIGFT VVVAILAYFL
601: LFSGFFISRD RIPPYWIWFH YLSLVKYPYE GVLQNEFDVR SPRCFVRGIQ MFDNTPLGMV PEALKVELLK SMSETLGMNI SRSTCVVTGE DVLKQQGITQ
701: LSKWNCFWVT VAWGFFFRFL FYLALLFGSR NKRR

Best Arabidopsis Sequence Match ( AT3G53510.1 )
(BLAST)

001: MSGLFGILSP AKRVNGDGLP LFYNIHKSVE LQRCHRDTAR VSVTLAELLM SVEDEGDDQS RAMDIAVASN FWSSVPSSRV PSSSPFVLSF KDLTYSVKIK
101: KKFKPFPCCG NSPFDGNDME MNTKVLLNGI SGEAREGEMM AVLGASGSGK STLIDALANR ISKESLRGDI TLNGEVLESS LHKVISAYVM QDDLLFPMLT
201: VEETLMFSAE FRLPSSLSKK KKKARVQALI DQLGLRNAAK TVIGDEGHRG VSGGERRRVS IGTDIIHDPI ILFLDEPTSG LDSTSAYMVV KVLQRIAQSG
301: SIVIMSIHQP SYRILGLLDK LIFLSRGNTV YSGSPTHLPQ FFSEFGHPIP ENENKPEFAL DLIRELEDSP EGTKSLVEFH KQWRAKQTSS QSRRNTNVSL
401: KDAISASISR GKLVSGATNL RSSFQTFANP FWTEMLVIGK RSILNSRRQP ELFGIRLGAV LVTGMILATI FWKLDNSPRG IQERLGFFAF AMSTTFYTCA
501: EAIPVFLQER YIFMRETAYN AYRRSSYVLA HTIISIPALI ILSAAFAAST FSAVGLAGGS EGFLFFFFTI LTAFWAGSSF VTFLSGVVSH VMIGFTVVVA
601: ILAYFLLFSG FFISRDRIPL YWIWFHYLSL VKYPYEGVLQ NEFEDPTKCF VRGIQMFDNS PLGQVPTAVK ISLLKSMSGV LGINVTAETC VTTGIDILKQ
701: QGITEISKWN CLWITVAWGF FFRVLFYFTL LIGSKNKRR

Arabidopsis Description

ABCG20ABC transporter G family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFG8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.