CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	91.95	92.19
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	85.91	84.66
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	85.77	84.52
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	85.77	84.41
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	85.77	84.41
TraesCS3B01G387500.1	Wheat	plastid	85.37	84.02
Os01t0836600-01	Rice	plasma membrane	84.16	83.71
CDY44641	Canola	plasma membrane	28.72	72.05
Bra005049.1-P	Field mustard	plasma membrane	28.32	71.04
Bra005051.1-P	Field mustard	plastid	56.51	68.57
CDX74853	Canola	plastid	56.51	68.23
KRH67592	Soybean	plastid	62.55	63.49
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.49	63.32
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	62.55	63.32
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	61.34	63.12
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	61.34	62.95
CDX69629	Canola	plastid	61.48	62.91
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	61.34	62.86
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	60.94	62.71
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	60.4	62.67
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	60.0	62.6
PGSC0003DMT400029838	Potato	extracellular	58.26	62.45
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	61.34	62.09
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	62.42	62.0
EES17614	Sorghum	cytosol, peroxisome, vacuole	59.06	61.97
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	61.21	61.96
AT2G39350.1	Thale cress	cytosol	61.07	61.49
AT3G53510.1	Thale cress	plasma membrane	60.94	61.43
Solyc05g054890.2.1	Tomato	cytosol	61.74	61.33
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.07	61.16
Solyc04g010210.1.1	Tomato	extracellular	58.39	60.92
CDY09810	Canola	plastid	61.48	60.9
CDX93388	Canola	plasma membrane	60.27	60.59
Solyc09g005970.1.1	Tomato	plasma membrane	59.73	60.3
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.0	60.24
CDY18451	Canola	cytosol, peroxisome, plasma membrane	59.87	60.11
PGSC0003DMT400061466	Potato	plasma membrane	59.6	59.92
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	60.67	59.87
CDY02907	Canola	cytosol, peroxisome, plasma membrane	50.47	59.21
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	52.35	58.91
CDX73549	Canola	cytosol, peroxisome, plasma membrane	59.73	58.86
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	62.68	58.67
CDX76121	Canola	cytosol	36.64	57.96
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.89	56.37
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	53.56	56.36
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.29	56.07
CDX76119	Canola	cytosol, peroxisome, plasma membrane	50.2	56.07
CDY40201	Canola	cytosol	53.02	55.79
CDX67624	Canola	cytosol, peroxisome, plasma membrane	52.62	55.45
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.62	55.45
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.81	54.37
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	52.21	53.66
CDY65003	Canola	cytosol, peroxisome, plasma membrane	50.87	53.08
CDY37656	Canola	cytosol, peroxisome, plasma membrane	50.74	53.02
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.87	53.01
CDX73404	Canola	plasma membrane	53.29	50.32
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.87	47.15
CDY50899	Canola	cytosol	20.27	45.35
Bra014774.1-P	Field mustard	plasma membrane	37.58	44.23
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	35.97	36.61
CDX76122	Canola	plasma membrane	61.88	35.96
Bra014776.1-P	Field mustard	cytosol	61.88	35.9
CDY02906	Canola	plasma membrane	61.21	35.49
EES03276	Sorghum	mitochondrion	28.99	35.29
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	28.05	33.07
EES01897	Sorghum	cytosol, plasma membrane, plastid	29.13	32.24
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	37.72	32.04
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	28.32	30.23
OQU76682	Sorghum	mitochondrion, plasma membrane	23.36	29.24
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	25.64	28.72
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	25.5	28.61
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	25.23	28.36
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	25.23	28.36
KXG27901	Sorghum	plasma membrane, plastid	24.56	28.2
EER92832	Sorghum	plasma membrane	25.37	24.77
EES13415	Sorghum	plastid	24.7	24.57

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:8057763	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	UniProt:C5XP26	EnsemblPlants:EES01718	ProteinID:EES01718	ProteinID:EES01718.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF453
SMART:SM00382	EnsemblPlantsGene:SORBI_3003G348100	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001A844F7	RefSeq:XP_002456598.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:66860178..66862828

Molecular Weight (calculated)

80215.4 Da

IEP (calculated)

9.962

GRAVY (calculated)

0.289

Length

745 amino acids

Sequence
(BLAST)

001: MAPAVQDRLP FLTSPPPVRE RGRNPSLAEM LRLVGAATVD PTAAADDDGS ASVFSLPLPT TPGRDAVAGG AVNGAGAMAI GRTVHFRLVF SSLTYSVRAK
101: QRGRGPGGLP QLQRRSDRVT AAATRALLDG VSGEAREGEI LAVMGASGSG KSTLIDALAN RISRDALKGA VTLNGEPLTG TVIKSISAYV MQDDLLFPML
201: TVTETLSFAA EFRLPRALSP AKKRARVQAL IDHLGLRAAA NTIIGDEGHR GVSGGERRRV SIGTDIIHDP ILLFLDEPTS GLDSTSAFMV VKVLRRIAES
301: GSIVITSIHQ PSQRILGLLD RLILLSGGRT VFSGPPSALP SYFAEFGFPV PDDENRAEFA LDLIREFESS PTGTKPLVDF HRAWQQMHAR SPGPVSAAAD
401: QMSLKEAISA SISRGKLVSG SDVAGEAASM HTYANPFWVE MKVLTKRSAI NTRRMPELFL IRLAAVVVTG AILATVFFRL DQSPKGAQER LGFFAFAMST
501: MFYTCADALP VFLNERYVFL RETAYGAYRR ASYVLSNAIV SFPALVVLSL AFAFTTFFAV GLAGGVPGFA FYTLAILASF WAGSGFVTFL SGVIPHVMIG
601: YTVVVAILAY FLLFSGFFIN RDRIPAYWIW FHYLSLIKYP FEGVLQNEFA RSGECFVRGA QIFDNSPLAA LPDAVKARVL ASISSALGVG IGADTCVVTG
701: RGVLHEVAVT QLGKWECLLV TMAWGFLFRI LFYFSLVLGS KNKRR

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.