CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	99.55	99.55
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	96.53	96.24
OQU76682	Sorghum	mitochondrion, plasma membrane	83.71	93.28
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	93.21	91.42
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	88.39	88.39
TraesCS7A01G378500.2	Wheat	cytosol, peroxisome, plasma membrane	87.93	84.37
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	87.93	84.13
Os06t0607700-01	Rice	plasma membrane	83.71	80.67
HORVU7Hr1G090350.4	Barley	cytosol, nucleus, plasma membrane	74.81	67.76
Solyc07g065780.1.1	Tomato	mitochondrion	43.29	64.49
VIT_19s0015g00960.t01	Wine grape	peroxisome	65.16	62.97
KRH46415	Soybean	plasma membrane	46.15	62.58
CDY24203	Canola	peroxisome	63.35	61.67
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.2	61.53
CDY43362	Canola	cytosol, peroxisome, plasma membrane	63.2	61.53
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	63.05	61.29
KRH14200	Soybean	cytosol	63.05	60.93
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	62.59	60.58
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	62.59	60.5
GSMUA_Achr1P19280_001	Banana	plasma membrane	60.33	37.63
EER92832	Sorghum	plasma membrane	42.53	36.96
KXG27901	Sorghum	plasma membrane, plastid	34.99	35.75
EES13415	Sorghum	plastid	38.61	34.18
EES17614	Sorghum	cytosol, peroxisome, vacuole	27.75	25.92
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	25.49	25.45
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	27.3	25.35
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	28.36	25.23
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	23.53	24.68
EES03276	Sorghum	mitochondrion	22.62	24.51
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	25.64	24.36
EES01897	Sorghum	cytosol, plasma membrane, plastid	24.43	24.07
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	27.75	23.12
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	25.04	22.68
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	26.85	20.3

Protein Annotations

MapMan:21.8.2.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1W0VTV6	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
EnsemblPlants:OQU76684	ProteinID:OQU76684	ProteinID:OQU76684.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF155	SMART:SM00382	EnsemblPlantsGene:SORBI_3010G187350	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0009DC915A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:52797394..52799989

Molecular Weight (calculated)

74337.2 Da

IEP (calculated)

9.702

GRAVY (calculated)

0.028

Length

663 amino acids

Sequence
(BLAST)

001: MSDEERMEMS TVECQHLAPS WQDNGDVDAE VKVEEDHPWP TKDGPLPIFL KFENVEYKVK MTLKNPLAAA RVAFASPMRV DQSSNCKHIL KGIAGSVDPG
101: EILALMGPSG SGKTTLLKIL GGRLGGGIKG QITYNDTPYS PCLKRRIGFV TQDDILFPQL TVEETLVFAA FIRLPACMSK QQKRNRVDAI ITELNLERCR
201: HTKIGGAFVK GVSGGERKRT SIGNEILVDP SLLLLDEPTS GLDSTSASKL ILILQRLAKT RRTIITTIHQ PSSRMFHMFD KLLLISDGHA IYHGKARDCM
301: HHFSSLGFVP EIPMNPAEFL LDLATGNLDD ISVPEALRGS PDPQEFRSQV IRHLQLKYRA GAGGRSRAPP TEQLRLALRA RKDHRRSIGW FQQFAVLSRR
401: TFRERTSDYL DKMRLAQAVG VALLLGLLWW KSQTGNEAQL RDQVGLIFYI CIFWTSSSLF GSVYVFPFEK LYLVKERKAD MYRLSAYYAS STLCDAVPHV
501: VYPVLFMAIL YFMAGLRRTV PCFFLTLLAT LLIVFTSQGT GELLGAAILS VKRAGVMASL VLMLFLLTGG YYVQHIPKFI RWLKYVSFMH YGFNLLLKAQ
601: YHGHLTYNCG SRGGCQRLQS SPSFGTVDLD GGMREVWILL AMALAYRLLA YFCLLKRISL TPL

Best Arabidopsis Sequence Match ( AT3G13220.1 )
(BLAST)

001: MEIRRSTEEV EENHVMQITG SNGIVHNMEF MPQAYLRNQY SSEIDIDEEF VSTYPLEDAP LPIFLKFEDV EYKVRNSHAS SANLVKTMVS KVVTHTNPDP
101: DGYKHILKGI TGSTGPGEIL ALMGPSGSGK TTLLKIMGGR LTDNVKGKLT YNDIPYSPSV KRRIGFVTQD DVLLPQLTVE ETLAFAAFLR LPSSMSKEQK
201: YAKIEMIIKE LGLERCRRTR VGGGFVKGIS GGERKRASIA YEILVDPSLL LLDEPTSGLD STSATKLLHI LQGVAKAGRT VITTIHQPSS RMFHMFDKLL
301: LISEGHPAFY GKARESMEYF SSLRILPEIA MNPAEFLLDL ATGQVSDISL PDELLAAKTA QPDSEEVLLK YLKQRYKTDL EPKEKEENHR NRKAPEHLQI
401: AIQVKKDWTL SWWDQFLILS RRTFRERRRD YFDKLRLVQS LGVAVVLGLL WWKSKTDTEA HLRDQVGLMF YICIFWTSSS LFGAVYVFPF EKIYLVKERK
501: AEMYRLSVYY VCSTLCDMVA HVLYPTFFMI IVYFMAEFNR NIPCFLFTVL TILLIAITSQ GAGEFLGASV LSIKRAGMIA SLVLMLFLLT GGYYVQHIPK
601: FMQWLKYLSF MHYGFRLLLK VQYSADQLFE CGSKGGCRTL QSSSSFDTIN LNGGLQELWV LLAMAFGYRL CAYFCLRKKI SICHL

Arabidopsis Description

ABCG26ABC transporter G family member 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK50]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.