CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	93.28	83.71
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	93.11	83.56
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	91.43	81.8
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	91.43	80.47
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	85.55	76.77
TraesCS7A01G378500.2	Wheat	cytosol, peroxisome, plasma membrane	85.38	73.52
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	85.21	73.16
Os06t0607700-01	Rice	plasma membrane	81.51	70.49
Solyc07g065780.1.1	Tomato	mitochondrion	47.23	63.15
KRH46415	Soybean	plasma membrane	48.4	58.9
HORVU7Hr1G090350.4	Barley	cytosol, nucleus, plasma membrane	72.1	58.61
VIT_19s0015g00960.t01	Wine grape	peroxisome	67.39	58.45
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.55	57.27
CDY24203	Canola	peroxisome	65.55	57.27
CDY43362	Canola	cytosol, peroxisome, plasma membrane	65.55	57.27
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	64.54	56.06
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	64.2	56.01
KRH14200	Soybean	cytosol	64.2	55.69
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	64.03	55.54
GSMUA_Achr1P19280_001	Banana	plasma membrane	63.19	35.37
EER92832	Sorghum	plasma membrane	44.87	34.99
KXG27901	Sorghum	plasma membrane, plastid	36.64	33.59
EES13415	Sorghum	plastid	39.16	31.11
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	27.23	24.4
EES03276	Sorghum	mitochondrion	24.71	24.02
EES17614	Sorghum	cytosol, peroxisome, vacuole	28.57	23.94
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	25.04	23.58
EES01897	Sorghum	cytosol, plasma membrane, plastid	26.55	23.48
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	28.07	23.39
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	29.24	23.36
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	26.22	22.35
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	26.55	21.58
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	28.74	21.48
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	28.74	19.5

Protein Annotations

MapMan:21.8.2.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1W0VTT1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
EnsemblPlants:OQU76682	ProteinID:OQU76682	ProteinID:OQU76682.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF155	SMART:SM00382	EnsemblPlantsGene:SORBI_3010G187201	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0009DC8D35	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:52765281..52767441

Molecular Weight (calculated)

66450.0 Da

IEP (calculated)

10.123

GRAVY (calculated)

0.148

Length

595 amino acids

Sequence
(BLAST)

001: MTLKNPLAAA RVAFASPMRV DQSSNCKHIL KGIAGSVDPG EILALMGPSG SGKTTLLKIL GGRLGGGIKG QITYNDTPYS PCLKRRIGFV TQDDILFPQL
101: TVEETLVFAA FIRLPACMSK QQKRNRVDAI ITELNLERCR HTKIGGAFVK GVSGGERKRT SIGNEILVDP SLLLLDEPTS VLDSTSASKL ILILQRLAKK
201: RRTIMTTIHQ PSSRMFHMFD KLLLISDGHA IYHGKARDSM HHFSSLGFVQ EIPMNPAEFL LDLATGNLDD ISVPEALCGH QARHLQLKYR AGGEPPAGRR
301: APTEQLRLAL WARKDHRRSI GWLQQFAVLS RRTFRERTSD YLDKMRLAQA VGVALLLGLL WWKSQTGNEA QLRDQVGLIF YICTFWTSSS LFGSVYVFPV
401: EKLYLVKERK ADMYRLSAYY ASSTLCDAVL HVVYPVLFMI IIYFMAGLRR TVPCFFLTLL ATLLIAFTSQ GTGELLGAAI LSGRRAGFIA SLVFVLFLLT
501: GGYYVHHIPK FIRWLKYISI MHHGFHLLLK AQYHGHLTYN CASRGGCQRL QSSPSFGTVD LDGGMCEVWI LLAMALSYRL LAYFCLLKRI TLTPL

Best Arabidopsis Sequence Match ( AT3G13220.1 )
(BLAST)

001: MEIRRSTEEV EENHVMQITG SNGIVHNMEF MPQAYLRNQY SSEIDIDEEF VSTYPLEDAP LPIFLKFEDV EYKVRNSHAS SANLVKTMVS KVVTHTNPDP
101: DGYKHILKGI TGSTGPGEIL ALMGPSGSGK TTLLKIMGGR LTDNVKGKLT YNDIPYSPSV KRRIGFVTQD DVLLPQLTVE ETLAFAAFLR LPSSMSKEQK
201: YAKIEMIIKE LGLERCRRTR VGGGFVKGIS GGERKRASIA YEILVDPSLL LLDEPTSGLD STSATKLLHI LQGVAKAGRT VITTIHQPSS RMFHMFDKLL
301: LISEGHPAFY GKARESMEYF SSLRILPEIA MNPAEFLLDL ATGQVSDISL PDELLAAKTA QPDSEEVLLK YLKQRYKTDL EPKEKEENHR NRKAPEHLQI
401: AIQVKKDWTL SWWDQFLILS RRTFRERRRD YFDKLRLVQS LGVAVVLGLL WWKSKTDTEA HLRDQVGLMF YICIFWTSSS LFGAVYVFPF EKIYLVKERK
501: AEMYRLSVYY VCSTLCDMVA HVLYPTFFMI IVYFMAEFNR NIPCFLFTVL TILLIAITSQ GAGEFLGASV LSIKRAGMIA SLVLMLFLLT GGYYVQHIPK
601: FMQWLKYLSF MHYGFRLLLK VQYSADQLFE CGSKGGCRTL QSSSSFDTIN LNGGLQELWV LLAMAFGYRL CAYFCLRKKI SICHL

Arabidopsis Description

ABCG26ABC transporter G family member 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK50]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.