Factsheet for VIT_19s0015g00960.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g065780.1.1	Tomato	mitochondrion	51.31	79.1
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	76.82	77.39
CDY24203	Canola	peroxisome	76.82	77.39
CDY43362	Canola	cytosol, peroxisome, plasma membrane	76.82	77.39
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	76.53	76.64
KRH14200	Soybean	cytosol	75.8	75.8
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	75.8	75.8
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	74.34	74.78
KRH46415	Soybean	plasma membrane	52.19	73.21
OQU76682	Sorghum	mitochondrion, plasma membrane	58.45	67.39
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	63.41	65.41
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	62.97	65.16
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	62.97	65.16
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	62.83	65.01
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	63.27	64.2
Os06t0607700-01	Rice	plasma membrane	63.27	63.08
TraesCS7A01G378500.2	Wheat	cytosol, peroxisome, plasma membrane	62.83	62.37
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	62.83	62.19
HORVU7Hr1G090350.4	Barley	cytosol, nucleus, plasma membrane	53.21	49.86
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	39.5	43.5
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	40.52	42.31
VIT_08s0032g00790.t01	Wine grape	plastid	44.46	40.78
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	39.5	40.09
GSMUA_Achr1P19280_001	Banana	plasma membrane	60.2	38.85
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.13	37.24
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	36.01	37.2
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	23.03	26.64
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	23.32	26.1
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.62	25.84
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.62	25.51
VIT_16s0050g01620.t01	Wine grape	cytosol	21.57	24.79
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.36	23.64
VIT_17s0000g02200.t01	Wine grape	cytosol	24.2	23.55
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.07	23.03
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	23.18	21.81

Protein Annotations

EntrezGene:100242992	wikigene:100242992	MapMan:21.8.2.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EMBL:AM439620	ProteinID:CAN73913	ProteinID:CAN73913.1	ProteinID:CBI39781
ProteinID:CBI39781.3	UniProt:D7UAL6	EMBL:FN596747	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009555	GO:GO:0009653	GO:GO:0009987
GO:GO:0010152	GO:GO:0010584	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100242992	wikigene:LOC100242992
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF155
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001BE53CB	ArrayExpress:VIT_19s0015g00960	EnsemblPlantsGene:VIT_19s0015g00960
EnsemblPlants:VIT_19s0015g00960.t01	RefSeq:XP_002267511	RefSeq:XP_002267511.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr19:+:9060515..9063661

Molecular Weight (calculated)

77938.4 Da

IEP (calculated)

9.076

GRAVY (calculated)

0.004

Length

686 amino acids

Sequence
(BLAST)

001: MDMGKQDEIE AMALSPPSMS SMHIAGSNGF GHNIDFMSQA YIRNRNSEID IEDDSFRTHQ DHPLPIFLKF EDVEYGVRNN AASRNPVKAV VSRVASQLSM
101: EQDNYKRILK GITGSIGPGE ILGLMGPSGS GKTTLLKIIG GRLHENVKGT ITYNDIPYNP ALKRRIGFVT QDDVLLPQLT VEETLVFAAF LRLPSNMSRK
201: QKYARVEMIV KELGLERCRH TKVGGGFVKG ISGGERKRTS IGYEILVDPS LLLLDEPTSG LDSTSANRLL QILQGVAKAG RTIITTIHQP SSRMFHMFNK
301: ILLIAEGYPV YYGKARESMD YFSSLRFVPE IAMNPAEFLL DLATGQVNDI SIPQDLQAPQ VPPESERDVV KYLQVKYKTE LEPKEKEENH WATKIPEHLQ
401: LAIQVKKDWT MSWWEQFLIL TRRTFRERCR DYFDKLRLVQ ALGVAVLLGL LWWKSKTGTE AQLRDQIGLM FYICIFWTSS SIFGAVYVFP FEKIYLVKER
501: KADMYRLSVY YVCSTMCDMV AHVVYPTIFM VILYFMAGFK RTVSCFFLTL FGILLIAITS QGAGELFGAA VLSIKRAGMI ASLVLMLFLL TGGYYVQHIP
601: QFMQWLKYIS FMYYGFRLML KVQYSGEQLY ECGSRGGCRT LQSSPSFDTV NLNGGLKEVW VLLAMAVGYR FFAYLCLRRR IDVCHL

Best Arabidopsis Sequence Match ( AT3G13220.1 )
(BLAST)

001: MEIRRSTEEV EENHVMQITG SNGIVHNMEF MPQAYLRNQY SSEIDIDEEF VSTYPLEDAP LPIFLKFEDV EYKVRNSHAS SANLVKTMVS KVVTHTNPDP
101: DGYKHILKGI TGSTGPGEIL ALMGPSGSGK TTLLKIMGGR LTDNVKGKLT YNDIPYSPSV KRRIGFVTQD DVLLPQLTVE ETLAFAAFLR LPSSMSKEQK
201: YAKIEMIIKE LGLERCRRTR VGGGFVKGIS GGERKRASIA YEILVDPSLL LLDEPTSGLD STSATKLLHI LQGVAKAGRT VITTIHQPSS RMFHMFDKLL
301: LISEGHPAFY GKARESMEYF SSLRILPEIA MNPAEFLLDL ATGQVSDISL PDELLAAKTA QPDSEEVLLK YLKQRYKTDL EPKEKEENHR NRKAPEHLQI
401: AIQVKKDWTL SWWDQFLILS RRTFRERRRD YFDKLRLVQS LGVAVVLGLL WWKSKTDTEA HLRDQVGLMF YICIFWTSSS LFGAVYVFPF EKIYLVKERK
501: AEMYRLSVYY VCSTLCDMVA HVLYPTFFMI IVYFMAEFNR NIPCFLFTVL TILLIAITSQ GAGEFLGASV LSIKRAGMIA SLVLMLFLLT GGYYVQHIPK
601: FMQWLKYLSF MHYGFRLLLK VQYSADQLFE CGSKGGCRTL QSSSSFDTIN LNGGLQELWV LLAMAFGYRL CAYFCLRKKI SICHL

Arabidopsis Description

ABCG26ABC transporter G family member 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK50]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.