Factsheet for VIT_08s0032g00790.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	81.95	82.5
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	80.75	81.84
Solyc01g006720.2.1	Tomato	plastid	77.41	79.97
PGSC0003DMT400054994	Potato	plastid	77.54	79.89
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	78.07	79.35
KRH68048	Soybean	plastid	78.48	79.32
CDX70095	Canola	plastid	75.8	78.64
CDY04991	Canola	plastid	74.47	77.58
Bra009203.1-P	Field mustard	plasma membrane	77.67	76.95
CDX98933	Canola	plasma membrane	77.67	76.95
AT5G06530.1	Thale cress	plasma membrane	77.01	76.7
CDY14079	Canola	plasma membrane	77.01	76.6
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	76.47	76.06
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	72.86	73.25
TraesCS4D01G271500.1	Wheat	plastid	69.79	69.41
HORVU4Hr1G072620.1	Barley	plastid	69.92	69.09
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	70.19	69.08
TraesCS4A01G032900.1	Wheat	plastid	70.19	68.9
GSMUA_Achr6P23160_001	Banana	plastid	67.65	68.84
EER92832	Sorghum	plasma membrane	70.05	68.68
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	65.37	68.39
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	68.72	68.26
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	69.79	67.7
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	60.7	58.51
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.44	49.76
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.71	47.49
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	40.64	44.97
VIT_19s0015g00960.t01	Wine grape	peroxisome	40.78	44.46
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	38.77	43.67
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	24.06	29.36
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	22.46	28.33
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	22.73	27.11
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	27.01	27.04
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	26.2	26.63
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	22.19	26.14
VIT_17s0000g02200.t01	Wine grape	cytosol	24.6	26.1
VIT_16s0050g01620.t01	Wine grape	cytosol	19.92	24.96
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	24.2	24.83

Protein Annotations

EntrezGene:100240995	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:CCB61554	ProteinID:CCB61554.1	UniProt:F6I3P4	EMBL:FN596742	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0009414
GO:GO:0009628	GO:GO:0010148	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF286	SMART:SM00382	SUPFAM:SSF52540
TIGR:TC65826	TMHMM:TMhelix	UniParc:UPI00015CA819	ArrayExpress:VIT_08s0032g00790	EnsemblPlantsGene:VIT_08s0032g00790	EnsemblPlants:VIT_08s0032g00790.t01
unigene:Vvi.15218	RefSeq:XP_010653238.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:4360764..4369672

Molecular Weight (calculated)

82702.2 Da

IEP (calculated)

9.561

GRAVY (calculated)

-0.083

Length

748 amino acids

Sequence
(BLAST)

001: MERPNSSSGI MRTKSDQLVE TAEAVAAAMR SPTSGEATGG AESGGTLSRK SSRRSMMSAS PGRAGGNSKN THIRKSRSAQ IKLDLDEVSS GAALSRASSA
101: SLGFSFSFTG FTVPPDEISD FKPFSDDDTP DDLEAGMRKQ RIQAEPTLPI YLKFKDVTYK VILKGMRTNV EKEILNGITG SVNPGEVLAL MGPSGSGKTT
201: LLNLLGGRLN QPTAGGSVTY NDQPYSKSLK SKIGFVTQDD VLFPHLTVRE TLTYAARLRL PKTLTKQQKE KRAVDVIYEL GLDRCQDTMI GGSFVRGVSG
301: GERKRVSIGN EIIINPSLLF LDEPTSGLDS TTALRIVQML HDIAEAGKTV LTTIHQPSSR LFHKFDKLIL LGKGNLLYFG KASGTMEYFS SIGCSPLITM
401: NPAEFLLDLA NGNLNDVSIP SELEDKVQTE HSETETRNGK PSPADVHEYL VEAYETRVAD QEKKKLMIPI PIDEELKSKV CSPKREWGAS WWEQYSILFR
501: RGLKERRHDY FSWLRVTQVA STATILGLLW WQSESTNPKG LQDQAGLLFF IAVFWGFFPV FTAIFTFPQE RAMLSKERAA DMYRLSAYFV ARTTSDLPLD
601: LILPVLFLII VYFMAGLRMD AGSFFLTMLT VFLCIVAAQG LGLAIGATLM DLKRATTLAS VTVMTFMLAG GYFVKKVPIF ISWIRYISFN YHTYKLLLKV
701: QYEHITPNVN GMKIDGGLKE VSALVAMVFG YRLLAYISLR RMKLHTGA

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.