Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70095 | Canola | plastid | 89.35 | 93.07 |
| CDY04991 | Canola | plastid | 88.95 | 93.04 |
| Bra028729.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 92.81 | 92.69 |
| Bra009203.1-P | Field mustard | plasma membrane | 93.08 | 92.58 |
| CDX98933 | Canola | plasma membrane | 93.08 | 92.58 |
| CDY14079 | Canola | plasma membrane | 92.68 | 92.55 |
| KRH72054 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 77.63 | 78.47 |
| KRH32924 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 76.83 | 78.18 |
| VIT_08s0032g00790.t01 | Wine grape | plastid | 76.7 | 77.01 |
| KRG96304 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 74.97 | 76.49 |
| Solyc01g006720.2.1 | Tomato | plastid | 73.37 | 76.11 |
| KRH68048 | Soybean | plastid | 74.7 | 75.81 |
| PGSC0003DMT400054994 | Potato | plastid | 73.24 | 75.76 |
| GSMUA_Achr8P04700_001 | Banana | cytosol, peroxisome, plasma membrane, plastid | 68.97 | 69.62 |
| TraesCS4D01G271500.1 | Wheat | plastid | 68.18 | 68.09 |
| EER92832 | Sorghum | plasma membrane | 68.84 | 67.76 |
| TraesCS4B01G272400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 68.44 | 67.63 |
| TraesCS4A01G032900.1 | Wheat | plastid | 68.58 | 67.59 |
| HORVU4Hr1G072620.1 | Barley | plastid | 68.04 | 67.5 |
| Zm00001d027723_P002 | Maize | cytosol, nucleus, plasma membrane | 67.51 | 67.33 |
| Os03t0157400-01 | Rice | cytosol, peroxisome, plasma membrane | 68.84 | 67.06 |
| GSMUA_Achr6P23160_001 | Banana | plastid | 65.11 | 66.53 |
| GSMUA_Achr1P04620_001 | Banana | cytosol, peroxisome, plasma membrane, plastid | 62.85 | 66.01 |
| AT1G31770.1 | Thale cress | cytosol, nucleus, peroxisome | 40.35 | 46.76 |
| AT4G27420.1 | Thale cress | cytosol, peroxisome, plasma membrane | 39.15 | 46.08 |
| AT3G25620.2 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 39.01 | 43.6 |
| AT3G13220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 38.48 | 42.19 |
| AT1G71960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 37.15 | 42.15 |
| AT1G53270.1 | Thale cress | plasma membrane | 22.37 | 28.47 |
| AT2G13610.1 | Thale cress | cytosol, peroxisome, plasma membrane | 24.5 | 28.35 |
| AT5G13580.1 | Thale cress | cytosol, peroxisome, plasma membrane | 26.76 | 27.65 |
| AT3G55100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 24.37 | 27.64 |
| AT3G55110.1 | Thale cress | cytosol, peroxisome, plasma membrane | 25.57 | 27.12 |
| AT3G53510.1 | Thale cress | plasma membrane | 26.1 | 26.52 |
| AT5G52860.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 20.77 | 26.49 |
| AT5G19410.2 | Thale cress | plastid | 22.24 | 26.38 |
| AT3G55090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 25.43 | 25.95 |
| AT2G37360.1 | Thale cress | cytosol, peroxisome, plasma membrane | 25.7 | 25.56 |
| AT2G39350.1 | Thale cress | cytosol | 25.17 | 25.54 |
| AT3G55130.1 | Thale cress | mitochondrion, peroxisome, plasma membrane | 24.5 | 25.38 |
| AT4G25750.1 | Thale cress | plasma membrane | 19.31 | 25.13 |
| AT2G01320.3 | Thale cress | peroxisome, plastid, vacuole | 23.7 | 24.45 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:830541 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | ProteinID:AED91029.1 | ProteinID:AED91030.1 | ProteinID:AED91031.1 | EMBL:AF389289 | EMBL:AK317422 |
| ArrayExpress:AT5G06530 | EnsemblPlantsGene:AT5G06530 | RefSeq:AT5G06530 | TAIR:AT5G06530 | RefSeq:AT5G06530-TAIR-G | EnsemblPlants:AT5G06530.1 |
| TAIR:AT5G06530.1 | EMBL:AY059787 | EMBL:AY114068 | Unigene:At.20832 | UniProt:B9DH73 | ProteinID:BAB11402.1 |
| EMBL:BT002271 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0010148 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | RefSeq:NP_001031843.1 |
| RefSeq:NP_568169.1 | RefSeq:NP_850781.2 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00211 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF286 | UniProt:Q93YS4 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI00000AA7BB | SEG:seg | : | : | : |
Description
ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
Coordinates
chr5:-:1989650..1994961
Molecular Weight (calculated)
82936.2 Da
IEP (calculated)
9.639
GRAVY (calculated)
0.051
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.