Factsheet for AT3G25620.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48079	Canola	plastid	91.22	92.18
CDY51602	Canola	plastid	91.22	92.04
CDY46506	Canola	cytosol, peroxisome, plasma membrane	91.07	91.62
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	90.92	91.47
CDX99764	Canola	cytosol, peroxisome, plasma membrane	90.18	88.47
Bra025152.1-P	Field mustard	plastid	63.69	86.46
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.05	68.64
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	67.86	67.56
PGSC0003DMT400019318	Potato	cytosol, nucleus, peroxisome	66.82	66.52
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	66.96	65.79
KRG92003	Soybean	cytosol	66.67	65.69
KRH75541	Soybean	cytosol, peroxisome, plasma membrane, plastid	65.03	64.45
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	59.08	63.72
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	64.43	63.3
AT1G31770.1	Thale cress	cytosol, nucleus, peroxisome	55.36	57.41
AT4G27420.1	Thale cress	cytosol, peroxisome, plasma membrane	51.49	54.23
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	45.68	46.37
AT5G06530.1	Thale cress	plasma membrane	43.6	39.01
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	37.8	37.08
AT1G53270.1	Thale cress	plasma membrane	25.0	28.47
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	27.53	27.95
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	26.93	27.89
AT5G19410.2	Thale cress	plastid	26.19	27.8
AT4G25750.1	Thale cress	plasma membrane	23.07	26.86
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	23.51	26.83
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	28.87	26.68
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	27.38	25.99
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	27.83	25.79
AT2G01320.3	Thale cress	peroxisome, plastid, vacuole	27.38	25.27
AT3G53510.1	Thale cress	plasma membrane	27.53	25.03
AT2G39350.1	Thale cress	cytosol	27.23	24.73
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	26.04	23.78
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	26.64	23.71

Protein Annotations

MapMan:11.4.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:822149	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEE77043.1	ProteinID:AEE77044.1	ArrayExpress:AT3G25620	EnsemblPlantsGene:AT3G25620
RefSeq:AT3G25620	TAIR:AT3G25620	RefSeq:AT3G25620-TAIR-G	EnsemblPlants:AT3G25620.2	TAIR:AT3G25620.2	EMBL:AY064994
Unigene:At.28290	ProteinID:BAB03081.1	EMBL:BT010173	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	RefSeq:NP_001189973.1	RefSeq:NP_189190.2
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0004507	PO:PO:0007064	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009009
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF303	UniProt:Q7XA72	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00000A4232	SEG:seg	:	:

Description

ABCG21ABC transporter G family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA72]

Coordinates

chr3:-:9316074..9319660

Molecular Weight (calculated)

75273.7 Da

IEP (calculated)

9.422

GRAVY (calculated)

-0.024

Length

672 amino acids

Sequence
(BLAST)

001: MMPPNEQESS FPKTPSANRH ETSPVQENRF SSPSHVNPCL DDDNDHDGPS HQSRQSSVLR QSLRPIILKF EELTYSIKSQ TGKGSYWFGS QEPKPNRLVL
101: KCVSGIVKPG ELLAMLGPSG SGKTTLVTAL AGRLQGKLSG TVSYNGEPFT SSVKRKTGFV TQDDVLYPHL TVMETLTYTA LLRLPKELTR KEKLEQVEMV
201: VSDLGLTRCC NSVIGGGLIR GISGGERKRV SIGQEMLVNP SLLLLDEPTS GLDSTTAARI VATLRSLARG GRTVVTTIHQ PSSRLYRMFD KVLVLSEGCP
301: IYSGDSGRVM EYFGSIGYQP GSSFVNPADF VLDLANGITS DTKQYDQIET NGRLDRLEEQ NSVKQSLISS YKKNLYPPLK EEVSRTFPQD QTNARLRKKA
401: ITNRWPTSWW MQFSVLLKRG LKERSHESFS GLRIFMVMSV SLLSGLLWWH SRVAHLQDQV GLLFFFSIFW GFFPLFNAIF TFPQERPMLI KERSSGIYRL
501: SSYYIARTVG DLPMELILPT IFVTITYWMG GLKPSLTTFI MTLMIVLYNV LVAQGVGLAL GAILMDAKKA ATLSSVLMLV FLLAGGYYIQ HIPGFIAWLK
601: YVSFSHYCYK LLVGVQYTWD EVYECGSGLH CSVMDYEGIK NLRIGNMMWD VLALAVMLLL YRVLAYLALR NL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.