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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46506 Canola cytosol, peroxisome, plasma membrane 99.55 99.55
CDX99764 Canola cytosol, peroxisome, plasma membrane 97.46 95.04
AT3G25620.2 Thale cress cytosol, nucleus, plasma membrane, plastid 91.47 90.92
Bra025152.1-P Field mustard plastid 62.28 84.04
VIT_01s0011g02730.t01 Wine grape cytosol, peroxisome, plasma membrane 68.26 67.46
Solyc04g006960.2.1 Tomato cytosol, nucleus, peroxisome 67.52 66.81
PGSC0003DMT400019318 Potato cytosol, nucleus, peroxisome 66.92 66.22
KRH34780 Soybean cytosol, peroxisome, plasma membrane 66.32 64.77
KRG92003 Soybean cytosol 65.87 64.52
KRH75541 Soybean cytosol, peroxisome, plasma membrane, plastid 64.22 63.27
KRH71117 Soybean cytosol, peroxisome, plasma membrane, plastid 64.52 63.01
KRH37571 Soybean cytosol, peroxisome, plasma membrane, plastid 58.23 62.44
Bra033878.1-P Field mustard cytosol, peroxisome, plastid 56.29 58.66
Bra019051.1-P Field mustard plasma membrane 52.4 54.95
Bra026352.1-P Field mustard cytosol, peroxisome, plasma membrane 52.25 54.7
Bra023202.1-P Field mustard cytosol, peroxisome, plasma membrane 56.59 51.99
Bra007999.1-P Field mustard plasma membrane 46.86 47.5
Bra003903.1-P Field mustard cytosol, peroxisome, plasma membrane 45.96 47.23
Bra016095.1-P Field mustard cytosol, peroxisome, plasma membrane 46.56 47.05
Bra009203.1-P Field mustard plasma membrane 43.56 38.54
Bra028729.1-P Field mustard cytosol, peroxisome, plasma membrane 42.96 38.16
Bra039378.1-P Field mustard cytosol, peroxisome, plasma membrane 38.77 38.03
Bra002234.1-P Field mustard cytosol 20.51 28.54
Bra030948.1-P Field mustard cytosol, peroxisome, plasma membrane 25.0 28.4
Bra013141.1-P Field mustard cytosol, peroxisome, plasma membrane 26.8 28.32
Bra013916.1-P Field mustard plastid 23.8 27.75
Bra022614.1-P Field mustard plastid 23.65 26.83
Bra005051.1-P Field mustard plastid 24.55 26.71
Bra033441.1-P Field mustard plastid 44.91 26.5
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 28.29 26.03
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 27.25 25.74
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 27.1 25.57
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 26.8 25.04
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 26.5 24.93
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 25.9 24.75
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 27.25 24.46
Bra014326.1-P Field mustard cytosol, peroxisome, plasma membrane 26.95 24.42
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 26.65 23.99
Bra014774.1-P Field mustard plasma membrane 21.11 22.27
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 28.14 19.87
Bra005049.1-P Field mustard plasma membrane 8.08 18.18
Bra014776.1-P Field mustard cytosol 26.2 13.63
Protein Annotations
MapMan:11.4.4.1MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlantsGene:Bra026514EnsemblPlants:Bra026514.1EnsemblPlants:Bra026514.1-Pncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887InterPro:IPR003439UniProt:M4ECK4InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF303
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00025464D7SEG:seg:
Description
AT3G25620 (E=2e-214) | ABC transporter family protein
Coordinates
chrA02:+:19833030..19836026
Molecular Weight (calculated)
74664.1 Da
IEP (calculated)
9.357
GRAVY (calculated)
0.075
Length
668 amino acids
Sequence
(BLAST)
001: MPPNEQESIF PIIPGESRNE TIPVQETWFS SPSHVIPCLD DDGPSHQSCQ SSVLRQSLRP IILKFEELTY TIKIQSGKGS YWFGSQEPKQ NRLILNGVSG
101: IVKPGELLAM LGPSGSGKTT LVTALAGRLQ GKLSGTVSYN GAPFTSSVKR RTGFVTQDDV LYPHLTVMET LTYTALLRLP KELTRKEKIQ QAESVISDLG
201: LTRCCNSVIG GGLIRGISGG ERKRVSIGQE LLVNPSLLLL DEPTSGLDST TAARIVATLR SLARGGRTVV TTIHQPSSRL YRMFDKVLVL SDGSPIYSGD
301: SGRVMEYFGS IGFQPGSSFV NPADFVLDLA NGITSDTKQY EQVEINGKLD RLEEQNSVKQ SLISAYKKNL YPPLKEEFSR AFPQDQTVNM SRSKTRLTNR
401: WPTSWWMQFS VLLKRGLKER SHESFSGLRI FMVMSVSLLS GLLWWHSRVA HIQDQVGLLF FFSIFWGFLP LFNAIFTFPQ ERPMLIKERS SGIYRLSSYY
501: IARTVGDLPM ELILPTIFVT ITYWMGGLKS SLTTFIMTLM IVLYSVLVSQ GVGLALGAIL MDAKKAATLS SVLMLVFLLA GGYYIQHIPG FIAWLKYISF
601: SHYCYKLLVG VQYTWDEVYE CGPGLHCSVM DYEGIKNLRL GNMMWDVLAL TLMLLLYRFL AYVALRNL
Best Arabidopsis Sequence Match ( AT3G25620.2 )
(BLAST)
001: MMPPNEQESS FPKTPSANRH ETSPVQENRF SSPSHVNPCL DDDNDHDGPS HQSRQSSVLR QSLRPIILKF EELTYSIKSQ TGKGSYWFGS QEPKPNRLVL
101: KCVSGIVKPG ELLAMLGPSG SGKTTLVTAL AGRLQGKLSG TVSYNGEPFT SSVKRKTGFV TQDDVLYPHL TVMETLTYTA LLRLPKELTR KEKLEQVEMV
201: VSDLGLTRCC NSVIGGGLIR GISGGERKRV SIGQEMLVNP SLLLLDEPTS GLDSTTAARI VATLRSLARG GRTVVTTIHQ PSSRLYRMFD KVLVLSEGCP
301: IYSGDSGRVM EYFGSIGYQP GSSFVNPADF VLDLANGITS DTKQYDQIET NGRLDRLEEQ NSVKQSLISS YKKNLYPPLK EEVSRTFPQD QTNARLRKKA
401: ITNRWPTSWW MQFSVLLKRG LKERSHESFS GLRIFMVMSV SLLSGLLWWH SRVAHLQDQV GLLFFFSIFW GFFPLFNAIF TFPQERPMLI KERSSGIYRL
501: SSYYIARTVG DLPMELILPT IFVTITYWMG GLKPSLTTFI MTLMIVLYNV LVAQGVGLAL GAILMDAKKA ATLSSVLMLV FLLAGGYYIQ HIPGFIAWLK
601: YVSFSHYCYK LLVGVQYTWD EVYECGSGLH CSVMDYEGIK NLRIGNMMWD VLALAVMLLL YRVLAYLALR NL
Arabidopsis Description
ABCG21ABC transporter G family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA72]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.