Factsheet for Bra028729.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04991	Canola	plastid	95.21	99.72
Bra009203.1-P	Field mustard	plasma membrane	94.41	94.04
AT5G06530.1	Thale cress	plasma membrane	92.69	92.81
VIT_08s0032g00790.t01	Wine grape	plastid	76.06	76.47
Solyc01g006720.2.1	Tomato	plastid	72.61	75.41
PGSC0003DMT400054994	Potato	plastid	72.61	75.21
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	68.75	69.49
TraesCS4D01G271500.1	Wheat	plastid	66.76	66.76
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	66.89	66.18
TraesCS4A01G032900.1	Wheat	plastid	67.02	66.14
GSMUA_Achr6P23160_001	Banana	plastid	64.63	66.12
HORVU4Hr1G072620.1	Barley	plastid	66.49	66.05
EER92832	Sorghum	plasma membrane	66.62	65.66
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	67.02	65.37
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	65.43	65.34
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	61.84	65.03
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	40.16	47.11
Bra019051.1-P	Field mustard	plasma membrane	39.36	46.47
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.83	45.77
Bra033441.1-P	Field mustard	plastid	65.43	43.46
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.16	42.96
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.83	42.88
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.57	42.31
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.1	42.21
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.43	41.82
Bra007999.1-P	Field mustard	plasma membrane	36.44	41.58
Bra025152.1-P	Field mustard	plastid	26.33	40.0
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.94	28.48
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.54	27.55
Bra005051.1-P	Field mustard	plastid	22.21	27.2
Bra013916.1-P	Field mustard	plastid	20.35	26.7
Bra002234.1-P	Field mustard	cytosol	17.02	26.67
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.6	26.47
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	25.4	26.31
Bra022614.1-P	Field mustard	plastid	20.48	26.15
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.47	26.03
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.66	26.01
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.34	25.77
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.8	25.28
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.8	25.04
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	24.6	24.87
Bra014774.1-P	Field mustard	plasma membrane	20.48	24.33
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.01	23.47
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.93	20.61
Bra005049.1-P	Field mustard	plasma membrane	7.58	19.19
Bra014776.1-P	Field mustard	cytosol	25.66	15.03

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra028729
EnsemblPlants:Bra028729.1	EnsemblPlants:Bra028729.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:M4EIW4	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF286	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002543184
SEG:seg	:	:	:	:	:

Description

AT5G06530 (E=0.0) | ABC transporter family protein

Coordinates

chrA02:-:2341135..2346057

Molecular Weight (calculated)

82826.7 Da

IEP (calculated)

9.449

GRAVY (calculated)

0.033

Length

752 amino acids

Sequence
(BLAST)

001: MSTEKPPLAS GLARTRSEQL YETVAAAIKS PHGSMDANAV PATAPATTGS GGGTLSRKSS RRLMMGVSPG RSGGAGTHIR KSRSAQLKLE LDEVSSGAAL
101: SRASSASLGL SFSFTGFAMP PEEISDSNPF SDDEMIPEDN ENKKPKFQAE PTLPIFLKFK EVTYKVVIKK LTSSVEKEIL SGINGSVSPG EVLALMGPSG
201: SGKTTLLSLL GGRISQSAIG GSITYNDKPY SKHLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKEQRAIG VIQELGLERC QDTMIGGAFV
301: RGVSGGEGKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TIQMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGN LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELED RVQVGNSDRE SRSGKPSPAV VHEYLVEAYE ARVTEQEKKK LTDPVPLGEE EARAKVLRLN RQWGASWWEQ
501: YCILFSRGLK ERRHEYFSWL RVIQVLSTAV ILGLLWWQSD IRTPGGLQDQ AGLLFFIAVF WGFFPVFTAI FAFPQERAML NKERAADMYR LSAYFLARTT
601: SDLPLDFILP SLFLLVVYFM TGLRLSPYPF FLSMLTVFLC IIAAQGLGLA IGAILMDLQK ATTLASVTVM TFMLAGGFFV KKVPVFISWI RYLSFNYHTY
701: KLLLKVQYQD FAQSINGMRI DNGLTEVVAL VVMIFGYRLL AYLSLRQMKI TT

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.