Factsheet for Bra014775.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76121	Canola	cytosol	65.81	97.66
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	86.84	85.73
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	85.55	84.58
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	81.4	80.37
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	74.96	73.8
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.25	70.63
Bra005051.1-P	Field mustard	plastid	56.8	64.66
Bra005049.1-P	Field mustard	plasma membrane	26.47	62.29
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	62.52	60.19
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.23	57.53
GSMUA_Achr5P28450_001	Banana	plasma membrane	56.8	56.88
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	56.94	56.37
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	54.94	55.49
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	53.93	55.36
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	54.94	55.33
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	53.79	55.21
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	53.79	55.21
Os05t0120000-00	Rice	plasma membrane	53.65	55.15
Os05t0120200-01	Rice	plasma membrane	55.08	55.08
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	54.79	54.71
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	53.22	54.63
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.8	54.45
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	51.93	54.34
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	56.8	53.43
Bra014774.1-P	Field mustard	plasma membrane	48.35	53.4
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	54.51	53.36
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	51.5	53.33
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	60.09	53.16
EES17614	Sorghum	cytosol, peroxisome, vacuole	53.93	53.1
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	51.22	53.04
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	56.37	52.89
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	53.65	52.67
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	59.94	52.64
Zm00001d035553_P001	Maize	plasma membrane	53.65	52.52
Os01t0836600-01	Rice	plasma membrane	56.08	52.34
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	56.37	52.05
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	56.37	52.05
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	58.8	51.89
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	59.08	51.88
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	55.94	51.72
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	55.94	51.72
TraesCS3B01G387500.1	Wheat	plastid	55.94	51.65
Zm00001d042953_P001	Maize	plasma membrane	56.22	51.64
Os03t0281900-01	Rice	cytosol, plasma membrane	57.37	50.95
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	58.8	48.87
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	54.79	48.54
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	55.94	43.49
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.51	43.23
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	37.91	40.4
HORVU4Hr1G058070.2	Barley	cytosol	44.35	38.04
HORVU5Hr1G021110.1	Barley	cytosol	23.18	37.76
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.19	35.88
Bra014776.1-P	Field mustard	cytosol	61.95	33.72
Bra013916.1-P	Field mustard	plastid	27.61	33.68
Bra022614.1-P	Field mustard	plastid	28.04	33.28
Bra002234.1-P	Field mustard	cytosol	22.6	32.92
Os03t0282100-00	Rice	cytosol, nucleus, plastid	35.77	32.64
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.47	32.59
GSMUA_Achr6P08820_001	Banana	plasma membrane	51.65	29.21
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.61	28.14
Bra007999.1-P	Field mustard	plasma membrane	26.47	28.07
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.04	28.0
Bra019051.1-P	Field mustard	plasma membrane	25.04	27.47
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	24.61	26.83
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.89	26.18
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.75	25.9
Bra025152.1-P	Field mustard	plastid	18.17	25.66
Bra009203.1-P	Field mustard	plasma membrane	26.75	24.77
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.47	24.6
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.04	24.07
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.89	23.49
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.18	21.98
Bra033441.1-P	Field mustard	plastid	27.04	16.7

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra014775	EnsemblPlants:Bra014775.1	EnsemblPlants:Bra014775.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M4DE56	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002544CF4	SEG:seg	:	:	:

Description

AT3G55110 (E=1e-307) | ABC transporter family protein

Coordinates

chrA04:+:3002430..3004529

Molecular Weight (calculated)

77756.5 Da

IEP (calculated)

8.289

GRAVY (calculated)

0.135

Length

699 amino acids

Sequence
(BLAST)

001: MPRVAAESQE ISLDGGCESP TLGELLKDLE DGHRKKDSGE DASVHHVLDL ASPETRPVPF LLSFNNLCFD VKGKAASVKT LLNDVSGEVC DGDILAVLGA
101: SGAGKSTLID ALAGRVSSLR GTVTLNGEKL LKSQLLKVIS AYVMQDDLLF PMLTVKETLM FASEFRLPRS LSKSKKMARV EALINQLGLR NAADTIIGNE
201: GHRGVSGGER RRVSIGIDII HDPIVLFLDE PTSGLDSTNA FMVVQVLKRI ARSGSMVIMS IHQPSARIID LLDRLIILSR GKSVFSGSPT SLPQFLSDFG
301: HPVPGKENIT EFALDLVREL EGSTKGTEEL VEFNEKWQQN QSPRATPMTT PYKALSLKES ITTSVSRGKL VSGSTSSNPI SMETVSYANT PLVETYILSK
401: RYMKNWSRTP ELIITRLATV LVTGLILATI YWRLDNTPRG AQERIAFFSF AMSTMFYTCA DNLPVFIHER YIFLRETTHN AYRTYSYVIS HVLVSLPQLL
501: ALSIAFAVTT FWTVGLSGGL ESFLYYCLII YAAFWSGSSF VTFISGLIPN VMISFMVTIS YLSYCLLMGG FFINRDRIPG YWIWFHYISL MKYPYEAVLI
601: NEFDDPSRCF VRGVQVFDGT LFAKVPDAIK VKMFDTLGNS LGTKIKESTC LRTGPDLLLQ QGISQLSKWD CLWITFAWGI FFRILFYLSL LFGNKNKRT

Best Arabidopsis Sequence Match ( AT3G55110.1 )
(BLAST)

001: MPRVSAEILD ISHTGGNESP TLGELLKDFN DSGRKKYPGE NAPTQHILDL APAAETRSVP FLLSFNNLSY NVVLRRRFDF SRRKTASVKT LLDDITGEAR
101: DGEILAVLGG SGAGKSTLID ALAGRVAEDS LKGTVTLNGE KVLQSRLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSLPKSKKME RVETLIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPILLFL DEPTSGLDST NAFMVVQVLK RIAQSGSVVI MSIHQPSARI IGLLDRLIIL SHGKSVFNGS
301: PVSLPSFFSS FGRPIPEKEN ITEFALDVIR ELEGSSEGTR DLVEFNEKWQ QNQTARATTQ SRVSLKEAIA ASVSRGKLVS GSSGANPISM ETVSSYANPP
401: LAETFILAKR YIKNWIRTPE LIGMRIGTVM VTGLLLATVY WRLDNTPRGA QERMGFFAFG MSTMFYCCAD NIPVFIQERY IFLRETTHNA YRTSSYVISH
501: ALVSLPQLLA LSIAFAATTF WTVGLSGGLE SFFYYCLIIY AAFWSGSSIV TFISGLIPNV MMSYMVTIAY LSYCLLLGGF YINRDRIPLY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV KGVQVFDGTL LAEVSHVMKV KLLDTLSGSL GTKITESTCL RTGPDLLMQQ GITQLSKWDC LWITLAWGLF FRILFYLSLL
701: FGSKNKRT

Arabidopsis Description

ABCG18ABC transporter G family member 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.