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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 76.69 48.31
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 71.56 45.08
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 71.33 44.93
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 71.33 44.93
CDY50899 Canola cytosol 27.74 35.74
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 55.24 35.48
Os05t0120000-00 Rice plasma membrane 52.91 33.38
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 60.14 32.7
CDX76121 Canola cytosol 35.9 32.7
Bra014774.1-P Field mustard plasma membrane 39.16 26.54
PGSC0003DMT400029838 Potato extracellular 42.66 26.33
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 44.06 26.11
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 43.59 25.83
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 43.12 25.77
Solyc04g010210.1.1 Tomato extracellular 42.66 25.63
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 45.22 25.63
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 45.22 25.63
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 44.52 25.57
KRG95875 Soybean cytosol, peroxisome, plasma membrane 43.59 25.41
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 42.89 25.34
CDX69629 Canola plastid 42.89 25.27
Solyc05g054890.2.1 Tomato cytosol 44.06 25.2
CDX76119 Canola cytosol, peroxisome, plasma membrane 39.16 25.19
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 42.66 25.17
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 43.12 25.14
AT3G53510.1 Thale cress plasma membrane 43.12 25.03
KRH67592 Soybean plastid 42.66 24.93
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 38.46 24.92
KRG92984 Soybean cytosol, peroxisome, plasma membrane 43.36 24.8
Bra005051.1-P Field mustard plastid 35.43 24.76
AT2G39350.1 Thale cress cytosol 42.66 24.73
CDY02907 Canola cytosol, peroxisome, plasma membrane 36.6 24.72
CDX74853 Canola plastid 35.43 24.64
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 40.56 24.58
Solyc09g005970.1.1 Tomato plasma membrane 42.19 24.53
CDY09810 Canola plastid 42.89 24.47
PGSC0003DMT400061466 Potato plasma membrane 42.19 24.43
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 40.33 24.37
CDY40201 Canola cytosol 40.09 24.29
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 40.09 24.29
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 41.49 24.18
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 39.39 23.9
CDX67624 Canola cytosol, peroxisome, plasma membrane 39.39 23.9
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 40.33 23.86
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 41.96 23.84
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 41.26 23.79
CDX93388 Canola plasma membrane 40.56 23.48
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 40.56 23.45
CDX73549 Canola cytosol, peroxisome, plasma membrane 41.26 23.41
CDY18451 Canola cytosol, peroxisome, plasma membrane 40.33 23.32
CDY37656 Canola cytosol, peroxisome, plasma membrane 38.69 23.28
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 37.76 23.18
CDY65003 Canola cytosol, peroxisome, plasma membrane 38.46 23.11
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 38.46 23.08
HORVU4Hr1G058070.2 Barley cytosol 43.59 22.94
CDX73404 Canola plasma membrane 40.09 21.8
HORVU3Hr1G005770.1 Barley endoplasmic reticulum 17.48 19.63
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 41.26 18.71
HORVU5Hr1G060690.4 Barley mitochondrion 29.6 17.52
HORVU4Hr1G018800.7 Barley plastid 23.54 15.73
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 24.01 15.7
HORVU3Hr1G054160.1 Barley plastid 21.91 15.46
HORVU3Hr1G066220.1 Barley plastid 28.44 15.31
HORVU1Hr1G056890.2 Barley cytosol 22.14 14.5
HORVU7Hr1G014870.1 Barley cytosol, peroxisome, plasma membrane 23.08 14.45
HORVU2Hr1G124860.3 Barley nucleus, peroxisome, plastid 18.65 14.44
HORVU4Hr1G072620.1 Barley plastid 25.17 14.27
HORVU7Hr1G081250.1 Barley mitochondrion 21.91 14.24
CDY02906 Canola plasma membrane 41.49 13.85
CDX76122 Canola plasma membrane 41.26 13.81
Bra014776.1-P Field mustard cytosol 41.26 13.79
HORVU7Hr1G090350.4 Barley cytosol, nucleus, plasma membrane 23.31 13.66
HORVU3Hr1G005830.3 Barley cytosol 3.96 4.5
CDY44641 Canola plasma membrane 1.63 2.36
Bra005049.1-P Field mustard plasma membrane 1.63 2.36
Protein Annotations
EnsemblPlants:HORVU5Hr1G021110.1EnsemblPlantsGene:HORVU5Hr1G021110GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0016787GO:GO:0016887InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSInterPro:IPR003439
InterPro:P-loop_NTPasencoils:CoilPANTHER:PTHR19241PANTHER:PTHR19241:SF294PFAM:PF00005PFscan:PS50893
ScanProsite:PS00211SEG:segSUPFAM:SSF52540MapMan:35.1::
Description
No Description!
Coordinates
chrchr5H:-:99487442..99494453
Molecular Weight (calculated)
35235.4 Da
IEP (calculated)
6.408
GRAVY (calculated)
0.030
Length
429 amino acids
Sequence
(BLAST)
001: MATSGHIVVE VGTDEDASAG QPPVAPVPYR LSFADLSYTV RTRGCRLASL LPVARASTGS PPPSTTKMLL DGISGEAREG ELFAVMGASG SXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXRAL SPARKRERVD ALIDQLGLSS AADTVIGDEG HRGVSGGERR
201: RVSIGTDIIH DPILLFLDEP TSGLDSASAF MVVQVLLDIA RSGSVVVMTI HQPSARILGI LGRLLLLSRG RTVYAGTPAG LMPFFHEFGK PIPDNENPAE
301: FALDTIRELE RQHDGTALLA DFNARWQANH RMIEDVNTMP LEVAISGSVS RGKLVAGTVT GTASSVPTFA NPLTVEVWVL IKRSFTNTRR MPELFVXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXX
Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)
001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK
Arabidopsis Description
ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.