Factsheet for HORVU1Hr1G056890.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G240600.1	Wheat	plasma membrane	95.57	95.87
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	94.96	95.11
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	94.81	95.1
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	80.92	76.37
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	79.69	74.79
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	76.18	73.93
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	55.42	62.05
Bra002234.1-P	Field mustard	cytosol	42.9	58.54
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.42	57.89
CDY13996	Canola	plasma membrane	42.29	57.83
AT5G19410.2	Thale cress	plastid	53.44	55.29
KRG89682	Soybean	cytosol, nucleus, peroxisome	55.11	55.03
KRH50602	Soybean	plastid	54.81	54.81
CDX92533	Canola	plastid	52.37	54.53
Solyc03g113690.1.1	Tomato	plastid	54.35	54.1
PGSC0003DMT400062852	Potato	plastid	54.2	53.71
HORVU3Hr1G054160.1	Barley	plastid	40.31	43.42
HORVU7Hr1G081250.1	Barley	mitochondrion	41.98	41.67
HORVU2Hr1G124860.3	Barley	nucleus, peroxisome, plastid	31.3	37.0
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	33.89	33.23
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	32.67	31.42
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	32.21	27.87
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	32.21	27.87
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	32.98	27.38
HORVU4Hr1G018800.7	Barley	plastid	26.26	26.79
HORVU7Hr1G014870.1	Barley	cytosol, peroxisome, plasma membrane	26.11	24.96
HORVU3Hr1G005770.1	Barley	endoplasmic reticulum	14.5	24.87
HORVU5Hr1G060690.4	Barley	mitochondrion	26.72	24.14
HORVU5Hr1G021110.1	Barley	cytosol	14.5	22.14
HORVU4Hr1G072620.1	Barley	plastid	24.89	21.53
HORVU7Hr1G090350.4	Barley	cytosol, nucleus, plasma membrane	23.51	21.04
HORVU4Hr1G058070.2	Barley	cytosol	24.58	19.75
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	18.93	18.9
HORVU3Hr1G066220.1	Barley	plastid	22.6	18.57
HORVU3Hr1G005830.3	Barley	cytosol	9.62	16.67

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EMBL:AK364631	UniProt:F2DL63	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
EnsemblPlantsGene:HORVU1Hr1G056890	EnsemblPlants:HORVU1Hr1G056890.2	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF158	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002006DC2	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DL63]

Coordinates

chrchr1H:+:417162938..417165584

Molecular Weight (calculated)

70970.2 Da

IEP (calculated)

8.456

GRAVY (calculated)

0.281

Length

655 amino acids

Sequence
(BLAST)

001: MDQDLSSELD PALLLSTSAS SSSPQDSASP SFSFYPPSPP EYTLAVTNLS CPAPRRANAA FLPSFLPCFP AAPAPAAAEG LLNSVSFTAS SSSILAVVGP
101: SGAGKSTLLR ILSGRGTGSE IAKPPTVCIN GYAVTSRAQL RRTCGFVTQD DNLLPLLTVR ETILFAARFR LGPSVTARER HERVEALMQE LRLSEVADSY
201: VGGGGGEAMS SSRGVSGGER KRVSIAVDMV HDPPVLLLDE PTSGLDSRSA MDVLALLHEV ARARRQVVVL SIHQPSYRML GYISSLLLLS RGSVAHCGSL
301: RSLEDALARL GHKIPTQLNP LELAMEVTEQ LQADHANFAM LRDNGQYEEE RESPGLANGS VHVPEHGYRS RAVEVSALTV RCWRTMYRTQ QLFAARAAQA
401: VVGGLGLGSV FFRVRADPDG LALRLGLFAF SLSFLLSSTV EALPILLHER RVLMREASRR AYRLSSYVVA NALVFAPCLL AVAILFSAPV YWLVGLRASV
501: AAFGFFVLAV WLIVLMASSL VLFLSAVSPD FILGNSLICI FLGVFFLFSG YFIPKESIPR YWAFMYYVSM YRYPLDLLLI NEYGGSARDR CVAWMGGDAM
601: NGNGVCLSTG GDVLRGRGVD EGMRWVNVGV MMGFFLAYRI MCWAVLVRRA SKTTL

Best Arabidopsis Sequence Match ( AT5G19410.2 )
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Arabidopsis Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.