Factsheet for Solyc03g113690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062852	Potato	plastid	96.35	95.92
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.6	73.05
KRG89682	Soybean	cytosol, nucleus, peroxisome	69.76	69.97
KRH50602	Soybean	plastid	69.3	69.62
Bra002234.1-P	Field mustard	cytosol	49.09	67.29
CDY13996	Canola	plasma membrane	48.48	66.6
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	58.66	65.98
CDX92533	Canola	plastid	61.25	64.07
AT5G19410.2	Thale cress	plastid	61.4	63.82
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	54.56	54.98
TraesCS1D01G240600.1	Wheat	plasma membrane	54.26	54.67
HORVU1Hr1G056890.2	Barley	cytosol	54.1	54.35
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	53.95	54.28
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	53.04	50.0
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	52.58	49.86
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	50.0	48.74
Solyc03g007690.1.1	Tomato	plastid	43.31	47.74
Solyc07g053300.1.1	Tomato	cytosol	40.73	44.08
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	40.58	43.0
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	39.51	42.35
Solyc11g018690.1.1	Tomato	cytosol	15.35	29.53
Solyc09g005970.1.1	Tomato	plasma membrane	32.52	29.0
Solyc04g010210.1.1	Tomato	extracellular	31.46	28.99
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	31.16	28.55
Solyc05g054890.2.1	Tomato	cytosol	32.07	28.13
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	26.75	28.03
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	26.14	27.3
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.23	27.08
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	26.14	26.63
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	26.44	26.56
Solyc09g098410.1.1	Tomato	nucleus	29.33	26.47
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	25.84	25.19
Solyc01g097430.2.1	Tomato	cytosol, nucleus	28.88	22.67
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	9.73	22.07
Solyc01g006720.2.1	Tomato	plastid	23.1	20.99
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	22.8	20.78
Solyc05g008350.2.1	Tomato	nucleus, plastid	22.19	20.56
Solyc07g065780.1.1	Tomato	mitochondrion	12.61	18.65

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4BKM1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF158	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc03g113690.1	EnsemblPlants:Solyc03g113690.1.1
TMHMM:TMhelix	UniParc:UPI0002767DFF	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:+:63761625..63763601

Molecular Weight (calculated)

73700.3 Da

IEP (calculated)

8.181

GRAVY (calculated)

0.112

Length

658 amino acids

Sequence
(BLAST)

001: MASPCTTYHP SPGSPENDSM ILFSTSTSCS PAKESTITNS NSSSFDSSSP PQSSLDKTYE LRIRNLSYTI SPNGSIFSSL MKKSTKPKTT ILKSVSFVAG
101: CSGILAIVGP SGTGKSTLLR VISGRVSDKE FDPKSIYLND HAVTTPAQLR NICGYVAQED NLLPLLTVKE TLMFSAKFRL RGMSSKEREE RVESLMQELD
201: LDHVANNFVG DEEKRGISGG ERKRVSIGVD MIHDPSILLL DEPTSGLDSS SALQVIELLS SMAKTKQRSI VLSIHQPSYR ILQYISNLLI LSHGSVVHYG
301: SLQSLEENIT RMGYEIPIQL NPLEFAMETI SVLENQEPHY KYQSCSYLRW EEAIIQDTAN KEGIDQAKVG AVSNKHCSSL FEIAVLCSRF WKIIYRTKQL
401: FLARTMQALV GGFGLGSVYI KMRNDEGAVA ERLGLFAFSL SFLLSSTVEA LPIYLQERRV IMKEASRGAY KISSYMIANT IIFLPFLFAV AILFAVPVYW
501: IVGLNPSITA FVFFTFVVWV IVLMASSLVL FLSAISPDFI SGNSLICTVL GAFFLFSGYF IPKECIPKYW IFMYYVSLYR YPLDALLTNE YWSLRHKCFT
601: WNDENHSECL LTGNDVLKNR GLDKDTRWMN VGIMLAFFVF YRVISWIVLA RKASKTTI

Best Arabidopsis Sequence Match ( AT5G19410.2 )
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Arabidopsis Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.