Factsheet for Bra002234.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13996	Canola	plasma membrane	97.92	98.12
CDX92533	Canola	plastid	96.88	73.93
AT5G19410.2	Thale cress	plastid	89.79	68.09
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.71	51.83
KRG89682	Soybean	cytosol, nucleus, peroxisome	69.58	50.91
KRH50602	Soybean	plastid	69.17	50.69
PGSC0003DMT400062852	Potato	plastid	68.54	49.77
Solyc03g113690.1.1	Tomato	plastid	67.29	49.09
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	58.96	48.38
HORVU1Hr1G056890.2	Barley	cytosol	58.54	42.9
TraesCS1D01G240600.1	Wheat	plasma membrane	58.33	42.88
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	58.12	42.73
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	58.12	42.66
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	56.67	39.19
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	56.04	38.54
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	52.71	37.48
Bra013916.1-P	Field mustard	plastid	43.75	36.65
Bra022614.1-P	Field mustard	plastid	44.58	36.33
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.67	34.01
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.38	33.7
Bra005049.1-P	Field mustard	plasma membrane	19.58	31.65
Bra005051.1-P	Field mustard	plastid	35.0	27.36
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	35.42	23.42
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.17	23.16
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.54	22.77
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.92	22.6
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	35.0	22.58
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.33	22.54
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.54	22.52
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.17	22.1
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.54	20.51
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.5	20.31
Bra019051.1-P	Field mustard	plasma membrane	26.46	19.94
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.46	19.91
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.29	19.82
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	26.46	19.81
Bra007999.1-P	Field mustard	plasma membrane	26.25	19.12
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.46	18.5
Bra025152.1-P	Field mustard	plastid	18.12	17.58
Bra014774.1-P	Field mustard	plasma membrane	22.92	17.38
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.04	17.19
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.17	17.03
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.67	17.02
Bra009203.1-P	Field mustard	plasma membrane	26.67	16.95
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.21	16.42
Bra014776.1-P	Field mustard	cytosol	35.21	13.16
Bra033441.1-P	Field mustard	plastid	26.67	11.31

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra002234	EnsemblPlants:Bra002234.1
EnsemblPlants:Bra002234.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
UniProt:M4CDF3	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PANTHER:PTHR19241	PANTHER:PTHR19241:SF158
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002545184	SEG:seg	:	:

Description

AT5G19410 (E=8e-223) | ABC transporter family protein

Coordinates

chrA10:+:10746310..10747752

Molecular Weight (calculated)

54599.5 Da

IEP (calculated)

6.903

GRAVY (calculated)

0.176

Length

480 amino acids

Sequence
(BLAST)

001: MYSAKFSLRD STAKEKEERV ESLLRDLGLV LVQDSFVGEG DEEDRGVSGG ERKRVSIAVE MIRDPPILLL DEPTSGLDSR NSLQVVELLA NMAKTKQRTV
101: VFSIHQPSYR ILDYISDYLI LSRGSVIHFG NLEHLEDSIA KLGFQIPEQL NPIEFAMEIV DSLRDSNQTD SSRSLLSSSS SIENENENDN TIAKKQEFRS
201: LFDVAEISFL CSRFCKIIYR TKQLFLARTM QAVVAGLGLG SVYTRLKRDE EGVAERLGLF AFSLSFLLSS TVEALPIYLR ERRVLMKEAS RGSYRISSYM
301: IANTIAFVPF LFVVSLLFSI PVYWIVGLNP SVHAFSFFVL CVWLIILMAS SLVLFLSAVA PDFISGNSLI CTVLGAFFLF SGYFIPKEKI PKPWMFMYYV
401: SLYRYPLESM LVNEYWSLRK ECFSGGDMGC LMTGEDVLRK RGLDKDTRWI NVGIMLAFFV FYRFLCWGIL LRKSYSKSTL

Best Arabidopsis Sequence Match ( AT5G19410.2 )
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Arabidopsis Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.