Factsheet for Bra013141.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93119	Canola	cytosol, peroxisome, plasma membrane	95.25	99.5
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	92.25	89.83
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.58	73.23
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	70.25	71.61
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	72.63	70.72
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	72.63	70.18
KRH64027	Soybean	extracellular	70.09	69.22
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	56.65	68.98
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	64.87	66.78
PGSC0003DMT400059944	Potato	cytosol, peroxisome, plasma membrane	67.41	66.46
GSMUA_Achr9P00310_001	Banana	cytosol	52.06	63.64
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	24.21	55.64
EES01897	Sorghum	cytosol, plasma membrane, plastid	53.64	50.37
TraesCS2A01G574700.1	Wheat	plasma membrane	51.42	50.0
HORVU2Hr1G124860.3	Barley	nucleus, peroxisome, plastid	43.83	50.0
TraesCS2D01G585300.1	Wheat	plasma membrane	53.16	49.85
TraesCS2B01G612200.1	Wheat	plasma membrane	53.16	49.78
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.83	47.11
Bra002234.1-P	Field mustard	cytosol	33.7	44.38
Zm00001d026706_P005	Maize	plasma membrane	52.22	44.0
Bra013916.1-P	Field mustard	plastid	38.61	42.58
Bra022614.1-P	Field mustard	plastid	38.13	40.92
Bra005051.1-P	Field mustard	plastid	32.59	33.55
Bra005049.1-P	Field mustard	plasma membrane	14.87	31.65
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	35.13	30.58
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.23	29.66
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.59	29.47
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	34.34	29.17
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.44	29.0
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.28	28.73
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.28	28.53
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.23	28.3
Bra019051.1-P	Field mustard	plasma membrane	28.01	27.79
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.85	27.08
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	27.37	26.99
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.32	26.8
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.9	26.65
Bra007999.1-P	Field mustard	plasma membrane	27.69	26.56
Bra025152.1-P	Field mustard	plastid	20.57	26.26
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.22	26.02
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.69	25.7
Bra009203.1-P	Field mustard	plasma membrane	28.8	24.11
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.69	24.07
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.48	23.94
Bra014774.1-P	Field mustard	plasma membrane	23.89	23.85
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.39	22.3
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.32	21.71
Bra014776.1-P	Field mustard	cytosol	34.18	16.82
Bra033441.1-P	Field mustard	plastid	29.27	16.34

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra013141	EnsemblPlants:Bra013141.1	EnsemblPlants:Bra013141.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M4D9I1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF460	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI00025409F2	SEG:seg	:	:	:

Description

AT2G13610 (E=3e-163) | ABC transporter family protein

Coordinates

chrA03:-:20225424..20227322

Molecular Weight (calculated)

70968.5 Da

IEP (calculated)

9.585

GRAVY (calculated)

0.182

Length

632 amino acids

Sequence
(BLAST)

001: MEKEGCEIEA LDIDYNITER KINVNPFGIF TRKPVPEADQ PVKLEDGTCK KVKHVLKGVT CRAKPWEILA IVGPSGAGKS SLLEILAGRL IPQTGSVIVN
101: QRPVDRANFK KISGYVTQKD TLFPLLTVEE TLLFSAKLRL KLPAEELRSR VKSLVRELGL EAVATARVGD DSLRGISGGE RRRVSIGVEV IHDPKVLILD
201: EPTSGLDSTS ALQIIDMLKL MAETRGRTIV LTIHQPGFRI VKLFNSVLLL ANGSTLNQGS VDQLGFYLRS NGLQPPLHEN IVEFAIESIE AITKHQRLLQ
301: QSRRVVVHVP TPQGEGRSGK FTLQQLFQQS KVADVGTMKI GKEFTRDFAN SRLGETMILT HRFSKNIFRT KELFACRTVQ MLGSGIVLGL IFHNLKDDLK
401: GARERVGLFA FILTFLLTST IEALPIFLQE REILMKETSS GSYRVSSYAV ANGLVYLPFL LILAILFSIP VYGLVGLNPS FMAFLHFLLL IWLILYTANS
501: VVVCFSALVP NFIVGNSVIS GVMGSFFLFS GYFISKNEIP GYWIFMHYIS LFKYPFEGFL INEFSKSSKC LEYGFGKCLM TEEGLLKEER YGEENRWRNV
601: VIMLCFVLLY RFVSYVILRC RCSQRSFKPT LV

Best Arabidopsis Sequence Match ( AT2G13610.1 )
(BLAST)

001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA

Arabidopsis Description

ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.