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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:
  • peroxisome 1
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, peroxisome, plastid
Any Predictor:peroxisome, plastid
MultiLoc:peroxisome
TargetP:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009492_P001 Maize mitochondrion, plasma membrane 37.55 75.64
TraesCS2A01G574700.1 Wheat plasma membrane 87.91 74.92
TraesCS2B01G612200.1 Wheat plasma membrane 88.99 73.04
TraesCS2D01G585300.1 Wheat plasma membrane 88.81 73.0
EES01897 Sorghum cytosol, plasma membrane, plastid 72.92 60.03
Zm00001d026706_P005 Maize plasma membrane 71.84 53.07
GSMUA_Achr8P32630_001 Banana cytosol, peroxisome, plasma membrane 44.22 47.21
CDX89610 Canola cytosol, peroxisome, plasma membrane 48.92 44.79
CDX93119 Canola cytosol, peroxisome, plasma membrane 48.56 44.46
GSMUA_Achr9P00310_001 Banana cytosol 40.97 43.91
Bra013141.1-P Field mustard cytosol, peroxisome, plasma membrane 50.0 43.83
VIT_07s0031g02550.t01 Wine grape cytosol, peroxisome, plasma membrane 50.18 43.78
KRH53911 Soybean cytosol, peroxisome, plasma membrane 48.74 43.55
KRH64027 Soybean extracellular 49.82 43.12
KRH59586 Soybean cytosol, peroxisome, plasma membrane 50.36 42.99
KRH40938 Soybean cytosol, peroxisome, plasma membrane 50.18 42.51
AT2G13610.1 Thale cress cytosol, peroxisome, plasma membrane 49.64 42.37
Solyc05g056470.1.1 Tomato cytosol, peroxisome, plasma membrane 45.13 40.72
PGSC0003DMT400059944 Potato cytosol, peroxisome, plasma membrane 45.67 39.47
HORVU3Hr1G054160.1 Barley plastid 42.96 39.14
HORVU1Hr1G056890.2 Barley cytosol 37.0 31.3
HORVU7Hr1G081250.1 Barley mitochondrion 36.64 30.76
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 30.51 24.82
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 29.78 24.7
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 32.85 23.07
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 31.41 22.99
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 31.41 22.99
HORVU5Hr1G060690.4 Barley mitochondrion 27.8 21.24
HORVU4Hr1G018800.7 Barley plastid 24.55 21.18
HORVU7Hr1G014870.1 Barley cytosol, peroxisome, plasma membrane 24.01 19.42
HORVU5Hr1G021110.1 Barley cytosol 14.44 18.65
HORVU3Hr1G005830.3 Barley cytosol 12.64 18.52
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 21.84 18.45
HORVU3Hr1G005770.1 Barley endoplasmic reticulum 11.73 17.02
HORVU4Hr1G072620.1 Barley plastid 22.92 16.78
HORVU7Hr1G090350.4 Barley cytosol, nucleus, plasma membrane 20.76 15.71
HORVU4Hr1G058070.2 Barley cytosol 22.2 15.09
HORVU3Hr1G066220.1 Barley plastid 17.51 12.17
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A287JT05InterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:HORVU2Hr1G124860EnsemblPlants:HORVU2Hr1G124860.3
InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061ScanProsite:PS00211PANTHER:PTHR19241
PANTHER:PTHR19241:SF230SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000B48398CSEG:seg:
Description
No Description!
Coordinates
chrchr2H:-:759290324..759292078
Molecular Weight (calculated)
60182.6 Da
IEP (calculated)
9.962
GRAVY (calculated)
0.157
Length
554 amino acids
Sequence
(BLAST)
001: ASGTAFTSNH PGRRRAGERA HEARRRRSSR KRQVRAGGRG HQLPHHRLRP ASPAQDMEQA VDALVDDLAL ARVADARVKD LSGGERRRVS IGVEAVRDPA
101: VLVLDEPTSG LDSASALQIV GALRAMAESR GRTVVLSIHQ PGARIVKMFD AVLLLAAGSV LHHGSVDDLH SLLAGAGLSL PPHVDAVEFA IDSVDELRLH
201: LHLQQQHQRD RRCTLQQLFQ QHKLQAQADD STSAGTLAAG GTSGQHRYAN SWPVEVAVLS QRFFKNVART RQLFACRTVC MLVAGLALGS IFYDLGDDKA
301: AERVGLFAFL LTFLLSSTTE ALPVFLQERE ILAKETSSGA YRVSAYAVAN ALVFLPFQLA LAAVFAAPAY WLTGLRRTAP AFFYFLLLIW LVLYTANSVV
401: ACFAAAAPDF VVGNAAVQGV MGSFFLFSGY FIRRSAMPAY WVPMHYLSLF KWPFEALLLN EFGGRCAARA MGVCVATGDE VLRREGIGEE CRWRNVAVMV
501: GFVALYRVLG YAVLRVRCSL TLRAAARSAL MLTSSSHHSA CFSASSTSTS STKA
Best Arabidopsis Sequence Match ( AT2G13610.1 )
(BLAST)
001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA
Arabidopsis Description
ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.