Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G019000.1 | Wheat | golgi | 96.03 | 54.5 |
| TraesCS3B01G017100.1 | Wheat | extracellular, plasma membrane, vacuole | 94.97 | 54.07 |
| TraesCS3A01G026500.1 | Wheat | extracellular, plasma membrane, vacuole | 94.97 | 53.9 |
| Os01t0121700-01 | Rice | plasma membrane | 89.95 | 50.9 |
| EES00402 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 85.71 | 48.8 |
| Zm00001d008512_P002 | Maize | golgi, plasma membrane, vacuole | 84.66 | 46.04 |
| GSMUA_Achr10P... | Banana | plasma membrane | 75.93 | 42.84 |
| Solyc05g008350.2.1 | Tomato | nucleus, plastid | 71.96 | 38.31 |
| PGSC0003DMT400078356 | Potato | extracellular, plasma membrane, vacuole | 72.22 | 37.76 |
| KRH35792 | Soybean | plasma membrane | 72.22 | 37.66 |
| AT2G01320.3 | Thale cress | peroxisome, plastid, vacuole | 70.9 | 36.81 |
| VIT_01s0011g04670.t01 | Wine grape | mitochondrion, plasma membrane | 70.9 | 36.76 |
| KRG90976 | Soybean | plasma membrane | 69.31 | 36.64 |
| CDY37372 | Canola | cytosol, peroxisome, plasma membrane | 70.9 | 36.56 |
| Bra014326.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 70.9 | 36.36 |
| CDY40385 | Canola | cytosol, peroxisome, plasma membrane | 70.9 | 36.36 |
| HORVU4Hr1G018800.7 | Barley | plastid | 22.75 | 13.4 |
| HORVU2Hr1G124860.3 | Barley | nucleus, peroxisome, plastid | 18.52 | 12.64 |
| HORVU3Hr1G054160.1 | Barley | plastid | 18.52 | 11.51 |
| HORVU7Hr1G014870.1 | Barley | cytosol, peroxisome, plasma membrane | 20.37 | 11.24 |
| HORVU5Hr1G060690.4 | Barley | mitochondrion | 20.11 | 10.48 |
| HORVU7Hr1G081250.1 | Barley | mitochondrion | 18.25 | 10.45 |
| HORVU4Hr1G072620.1 | Barley | plastid | 20.9 | 10.44 |
| HORVU5Hr1G021120.1 | Barley | cytosol, peroxisome, plasma membrane | 18.52 | 10.28 |
| HORVU4Hr1G058160.2 | Barley | cytosol, peroxisome | 17.2 | 9.91 |
| HORVU3Hr1G007180.1 | Barley | cytosol, peroxisome, plasma membrane | 17.46 | 9.88 |
| HORVU1Hr1G056890.2 | Barley | cytosol | 16.67 | 9.62 |
| HORVU3Hr1G087130.1 | Barley | plasma membrane, plastid | 18.78 | 9.38 |
| HORVU0Hr1G007130.1 | Barley | plasma membrane, plastid | 18.78 | 9.38 |
| HORVU1Hr1G009920.2 | Barley | plasma membrane, plastid | 18.78 | 9.0 |
| HORVU7Hr1G090350.4 | Barley | cytosol, nucleus, plasma membrane | 16.14 | 8.33 |
| HORVU3Hr1G005770.1 | Barley | endoplasmic reticulum | 5.82 | 5.76 |
| HORVU4Hr1G058070.2 | Barley | cytosol | 11.9 | 5.52 |
| HORVU3Hr1G066220.1 | Barley | plastid | 10.32 | 4.89 |
| HORVU5Hr1G021110.1 | Barley | cytosol | 4.5 | 3.96 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G005830.3 | EnsemblPlantsGene:HORVU3Hr1G005830 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ABC_2_trans |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF262 | PFAM:PF01061 | TMHMM:TMhelix | UniParc:UPI000B48692A | UniProt:A0A287K0I5 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:14202667..14205226
Molecular Weight (calculated)
42486.4 Da
IEP (calculated)
10.203
GRAVY (calculated)
-0.116
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: PSCFQQFRYQ CPDHENPAEF LADLISTDYS SAESVQSSQK RIENLIDEFA NKVLITEFNS PVRQSEGSEF SNKLAQKSTR KQRRGWWRQF RLLFKRAWMQ
101: AFRDGPTNKV RARMSVASAI IFGSVFWRMG KTQTSIQDRM GLLQVAAINT AMAALTKTVG VFPKERAIVD RERAKGSYAL GPYLSSKLLA EIPIGAAFPL
201: MFGSILYPMA KLHPTISRFA KFCGIVTVES FAASAMGLTV GAIAPTTEAA MALGPSLMTV FIVFGGYYVN PDNTPVIFRW IPKASLIRWA FQGLCVNEFK
301: GLQFEHQHSY DVQTGEQALE RFSLGGIRIA GTLAAQGRIL MFWYWLTYLL LKKNRPRYQQ LVPPSEEDQS KQQGSPVV
101: AFRDGPTNKV RARMSVASAI IFGSVFWRMG KTQTSIQDRM GLLQVAAINT AMAALTKTVG VFPKERAIVD RERAKGSYAL GPYLSSKLLA EIPIGAAFPL
201: MFGSILYPMA KLHPTISRFA KFCGIVTVES FAASAMGLTV GAIAPTTEAA MALGPSLMTV FIVFGGYYVN PDNTPVIFRW IPKASLIRWA FQGLCVNEFK
301: GLQFEHQHSY DVQTGEQALE RFSLGGIRIA GTLAAQGRIL MFWYWLTYLL LKKNRPRYQQ LVPPSEEDQS KQQGSPVV
001: MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEGSKV
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEGSKV
Arabidopsis Description
ABCG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSW5]
SUBAcon: [peroxisome,plastid,vacuole]
SUBAcon: [peroxisome,plastid,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.