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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, vacuole

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plastid, vacuole
Any Predictor:mitochondrion, nucleus, peroxisome, plastid, vacuole
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37372 Canola cytosol, peroxisome, plasma membrane 89.84 89.22
CDY40385 Canola cytosol, peroxisome, plasma membrane 89.7 88.6
Bra014326.1-P Field mustard cytosol, peroxisome, plasma membrane 89.42 88.33
VIT_01s0011g04670.t01 Wine grape mitochondrion, plasma membrane 76.1 75.99
KRH35792 Soybean plasma membrane 73.76 74.07
KRG90976 Soybean plasma membrane 72.25 73.57
Solyc05g008350.2.1 Tomato nucleus, plastid 71.29 73.1
GSMUA_Achr10P... Banana plasma membrane 67.17 72.99
PGSC0003DMT400078356 Potato extracellular, plasma membrane, vacuole 72.12 72.61
EES00402 Sorghum endoplasmic reticulum, golgi, plasma membrane 65.52 71.84
TraesCS3B01G017100.1 Wheat extracellular, plasma membrane, vacuole 65.25 71.54
TraesCS3D01G019000.1 Wheat golgi 65.38 71.47
TraesCS3A01G026500.1 Wheat extracellular, plasma membrane, vacuole 64.97 71.02
HORVU3Hr1G005830.3 Barley cytosol 36.81 70.9
Os01t0121700-01 Rice plasma membrane 64.7 70.51
Zm00001d008512_P002 Maize golgi, plasma membrane, vacuole 66.07 69.21
HORVU3Hr1G005770.1 Barley endoplasmic reticulum 31.46 59.95
AT4G27420.1 Thale cress cytosol, peroxisome, plasma membrane 24.18 27.59
AT1G31770.1 Thale cress cytosol, nucleus, peroxisome 24.45 27.47
AT3G25620.2 Thale cress cytosol, nucleus, plasma membrane, plastid 25.27 27.38
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 24.45 26.89
AT5G52860.1 Thale cress cytosol, nucleus, plasma membrane, plastid 21.02 25.98
AT1G53270.1 Thale cress plasma membrane 21.02 25.93
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 23.21 25.53
AT4G25750.1 Thale cress plasma membrane 19.64 24.78
AT3G13220.1 Thale cress cytosol, peroxisome, plasma membrane 23.21 24.67
AT2G13610.1 Thale cress cytosol, peroxisome, plasma membrane 21.98 24.65
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 24.04 24.14
AT3G53510.1 Thale cress plasma membrane 24.45 24.09
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 23.35 24.01
AT5G19410.2 Thale cress plastid 20.74 23.85
AT5G06530.1 Thale cress plasma membrane 24.45 23.7
AT2G39350.1 Thale cress cytosol 23.49 23.11
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 23.21 22.96
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 22.8 22.83
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 23.63 22.78
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:814660UniProt:A0A178VSW5InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AEC05434.1ArrayExpress:AT2G01320EnsemblPlantsGene:AT2G01320RefSeq:AT2G01320
TAIR:AT2G01320RefSeq:AT2G01320-TAIR-GEnsemblPlants:AT2G01320.3TAIR:AT2G01320.3Unigene:At.43048GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887InterPro:IPR003439RefSeq:NP_849922.1ProteinID:OAP08163.1
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281ScanProsite:PS00211PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF262SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0000196A90
SEG:seg:::::
Description
ABCG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSW5]
Coordinates
chr2:-:154131..158204
Molecular Weight (calculated)
79176.0 Da
IEP (calculated)
5.870
GRAVY (calculated)
-0.054
Length
728 amino acids
Sequence
(BLAST)
001: MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEAGSKV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.